Variant report

Variant	rs8055784
Chromosome Location	chr16:74697421-74697422
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:28)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:28 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr16:74697276-74698414	H1-hESC	embryonic stem cell:	n/a	n/a
2	POLR2A	chr16:74697345-74698231	HepG2	liver:	n/a	n/a
3	POLR2A	chr16:74697307-74697472	K562	blood:	n/a	n/a
4	POLR2A	chr16:74696896-74698252	K562	blood:	n/a	n/a
5	POLR2A	chr16:74696942-74698375	GM12878	blood:	n/a	n/a
6	POLR2A	chr16:74697170-74699187	GM12891	blood:	n/a	n/a
7	POLR2A	chr16:74696901-74698428	K562	blood:	n/a	n/a
8	POLR2A	chr16:74697007-74699353	K562	blood:	n/a	n/a
9	POLR2A	chr16:74697046-74699481	GM12878	blood:	n/a	n/a
10	BHLHE40	chr16:74697409-74697495	K562	blood:	n/a	n/a
11	POLR2A	chr16:74697098-74698251	GM12892	blood:	n/a	n/a
12	POLR2A	chr16:74697200-74697488	GM12891	blood:	n/a	n/a
13	POLR2A	chr16:74696926-74698005	K562	blood:	n/a	n/a
14	POLR2A	chr16:74697369-74698408	Hela-S3	cervix:	n/a	n/a
15	POLR2A	chr16:74697220-74697436	H1-hESC	embryonic stem cell:	n/a	n/a
16	MAFF	chr16:74697321-74697458	K562	blood:	n/a	n/a
17	POLR2A	chr16:74697098-74698202	A549	lung:	n/a	n/a
18	ZMIZ1	chr16:74697392-74697592	K562	blood:	n/a	n/a
19	POLR2A	chr16:74697139-74698006	IMR90	lung:	n/a	n/a
20	POLR2A	chr16:74697266-74698235	GM12878	blood:	n/a	n/a
21	POLR2A	chr16:74697077-74698170	GM12892	blood:	n/a	n/a
22	POLR2A	chr16:74696902-74697514	K562	blood:	n/a	n/a
23	POLR2A	chr16:74697159-74697459	Hela-S3	cervix:	n/a	n/a
24	HEY1	chr16:74697140-74700066	K562	blood:	n/a	n/a
25	POLR2A	chr16:74696987-74698136	GM12892	blood:	n/a	n/a
26	POLR2A	chr16:74697075-74697427	GM12891	blood:	n/a	n/a
27	POLR2A	chr16:74697276-74697736	HepG2	liver:	n/a	n/a
28	POLR2A	chr16:74697224-74697967	PFSK-1	brain:	n/a	n/a

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr16:74657630..74659377-chr16:74696166..74698749,2	K562	blood:
2	chr16:74695152..74698756-chr16:74699147..74702582,8	MCF-7	breast:
3	chr16:74660349..74663096-chr16:74695955..74699046,3	MCF-7	breast:
4	chr16:74695853..74699155-chr16:74725334..74728139,3	K562	blood:
5	chr16:74696101..74698353-chr16:74734070..74735926,3	MCF-7	breast:
6	chr16:74696660..74698219-chr16:74749550..74751165,2	K562	blood:
7	chr16:74639132..74641827-chr16:74694832..74697814,3	MCF-7	breast:
8	chr16:74691160..74693410-chr16:74694917..74697832,4	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000262904	TF binding region
ENSG00000090863	Chromatin interaction
ENSG00000262904	Chromatin interaction
ENSG00000168404	Chromatin interaction
ENSG00000168411	Chromatin interaction
ENSG00000103089	Chromatin interaction

Extended variants
information (count: 140 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:129)

rs_ID	r²[population]
rs1019572	0.92[JPT][hapmap]
rs1019573	0.92[JPT][hapmap]
rs10400930	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10500587	0.92[JPT][hapmap]
rs1138860	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11639812	0.91[CHB][hapmap];0.92[JPT][hapmap]
rs11644298	0.90[CHB][hapmap];0.85[CHD][hapmap];0.92[JPT][hapmap]
rs11648868	0.81[CHB][hapmap];0.80[CHD][hapmap];0.92[JPT][hapmap]
rs12325017	0.92[JPT][hapmap]
rs12445991	0.91[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap]
rs12448026	0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.90[MEX][hapmap];0.98[MKK][hapmap];0.90[TSI][hapmap];0.91[YRI][hapmap]
rs12598701	0.91[CHB][hapmap];0.92[JPT][hapmap]
rs12921903	0.87[ASN][1000 genomes]
rs12935075	0.85[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs13339156	0.87[ASN][1000 genomes]
rs13339161	0.80[CEU][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.92[JPT][hapmap];0.82[MEX][hapmap]
rs1469140	0.81[CHB][hapmap];0.81[CHD][hapmap];0.92[JPT][hapmap]
rs1820262	0.92[CEU][hapmap]
rs2098754	0.80[CEU][hapmap];0.90[CHB][hapmap];0.81[CHD][hapmap];0.92[JPT][hapmap];0.92[LWK][hapmap];0.96[MKK][hapmap];0.84[YRI][hapmap]
rs2303275	0.92[JPT][hapmap]
rs2303278	0.91[CHB][hapmap];0.92[JPT][hapmap]
rs2303281	0.81[CHB][hapmap];0.81[CHD][hapmap];0.92[JPT][hapmap]
rs28377859	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28502731	0.86[ASN][1000 genomes]
rs3785312	0.81[CHB][hapmap];0.92[JPT][hapmap]
rs3826239	0.81[CHB][hapmap];0.92[JPT][hapmap]
rs4072222	0.83[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.87[MKK][hapmap];0.95[ASN][1000 genomes]
rs4072450	0.84[CEU][hapmap];0.91[CHB][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs4243108	1.00[ASW][hapmap];0.84[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.92[JPT][hapmap];0.92[LWK][hapmap];0.90[MEX][hapmap];0.96[MKK][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4271617	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4286131	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4287593	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4302071	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4344772	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4438331	0.90[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs4462623	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4548905	0.86[ASN][1000 genomes]
rs4564599	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4588013	0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4600490	0.91[CHB][hapmap];0.85[CHD][hapmap];0.92[JPT][hapmap]
rs4887772	0.80[CEU][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.92[JPT][hapmap];0.82[MEX][hapmap]
rs4887776	0.84[ASW][hapmap];0.80[CEU][hapmap];0.91[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.86[ASN][1000 genomes]
rs4887777	0.84[ASW][hapmap];0.83[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.91[YRI][hapmap];0.86[ASN][1000 genomes]
rs4887779	0.84[ASW][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.86[ASN][1000 genomes]
rs4887784	0.80[CEU][hapmap]
rs4888242	0.92[JPT][hapmap]
rs4888253	0.80[CEU][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.82[GIH][hapmap];0.92[JPT][hapmap];0.82[MEX][hapmap]
rs4888256	0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.91[GIH][hapmap];0.92[JPT][hapmap];0.92[LWK][hapmap];0.85[MEX][hapmap];0.98[MKK][hapmap];0.90[TSI][hapmap];0.91[YRI][hapmap]
rs4888257	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4888258	0.86[ASN][1000 genomes]
rs4888259	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4888260	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4888262	0.85[JPT][hapmap];0.87[MKK][hapmap]
rs4888265	0.84[MKK][hapmap]
rs4888266	0.84[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs4888267	0.81[JPT][hapmap]
rs4888270	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4888274	0.85[JPT][hapmap]
rs57488599	0.95[ASN][1000 genomes]
rs58136167	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62053563	0.82[EUR][1000 genomes]
rs6564117	0.83[CHB][hapmap];0.92[JPT][hapmap]
rs6564145	0.81[ASN][1000 genomes]
rs6564146	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6564147	0.84[ASN][1000 genomes]
rs6564148	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6564149	0.86[ASN][1000 genomes]
rs6564152	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6564153	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6564154	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.88[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6564155	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6564157	0.91[CHB][hapmap];0.81[JPT][hapmap];0.93[ASN][1000 genomes]
rs6564159	0.80[CEU][hapmap];0.85[JPT][hapmap]
rs7184754	0.86[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs7185026	0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.94[GIH][hapmap];0.92[JPT][hapmap];0.85[LWK][hapmap];0.85[MEX][hapmap];0.98[MKK][hapmap];0.90[TSI][hapmap];0.91[YRI][hapmap]
rs7185722	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7189123	0.91[CHB][hapmap];0.84[CHD][hapmap];0.92[JPT][hapmap];0.82[MEX][hapmap]
rs7190631	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7191665	0.85[JPT][hapmap];0.88[MKK][hapmap]
rs7193423	0.87[ASN][1000 genomes]
rs7193508	0.87[ASN][1000 genomes]
rs7193583	0.91[YRI][hapmap];0.86[ASN][1000 genomes]
rs7193959	0.81[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.90[ASN][1000 genomes]
rs7194143	0.90[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs7194687	0.86[ASN][1000 genomes]
rs7195135	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7195499	0.96[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7196369	0.82[CHD][hapmap];0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs7201320	0.88[MKK][hapmap]
rs7203452	0.96[CEU][hapmap];1.00[CHB][hapmap];0.84[CHD][hapmap];0.87[GIH][hapmap];0.92[JPT][hapmap];0.92[LWK][hapmap];0.84[MEX][hapmap];0.98[MKK][hapmap];0.90[TSI][hapmap];0.91[YRI][hapmap]
rs7204382	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];0.91[YRI][hapmap];0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7204804	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7205258	0.84[ASW][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[YRI][hapmap];0.83[ASN][1000 genomes]
rs7342732	1.00[ASW][hapmap];0.84[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.90[MEX][hapmap];0.96[MKK][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8045848	0.90[CHB][hapmap];0.90[CHD][hapmap];0.92[JPT][hapmap]
rs8047243	0.82[ASN][1000 genomes]
rs8048133	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8048596	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs8049056	0.85[ASN][1000 genomes]
rs8050615	0.82[ASN][1000 genomes]
rs8050624	1.00[ASW][hapmap];0.84[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.90[MEX][hapmap];0.96[MKK][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs8052923	0.84[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs8053084	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8054836	0.82[EUR][1000 genomes]
rs8055803	0.82[ASN][1000 genomes]
rs8056718	0.85[ASN][1000 genomes]
rs8056788	0.81[AMR][1000 genomes]
rs8057279	0.87[ASN][1000 genomes]
rs8058034	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8058133	0.85[JPT][hapmap]
rs8058437	0.82[ASN][1000 genomes]
rs8058692	0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.85[MEX][hapmap];0.98[MKK][hapmap];0.90[TSI][hapmap];0.91[YRI][hapmap]
rs8058922	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.92[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8059869	0.87[CEU][hapmap];0.85[JPT][hapmap];0.82[MEX][hapmap];0.85[TSI][hapmap]
rs8062404	0.85[ASN][1000 genomes]
rs8062783	0.88[MKK][hapmap]
rs8062959	0.87[ASN][1000 genomes]
rs918782	0.96[CEU][hapmap];1.00[CHB][hapmap];0.81[CHD][hapmap];0.82[GIH][hapmap];0.92[JPT][hapmap];0.85[LWK][hapmap];0.86[MEX][hapmap];0.98[MKK][hapmap];0.87[TSI][hapmap];0.84[YRI][hapmap]
rs9888976	0.91[CHB][hapmap];0.92[JPT][hapmap]
rs9921672	0.83[ASN][1000 genomes]
rs9923145	0.85[JPT][hapmap];0.87[MKK][hapmap]
rs9923616	0.91[CHB][hapmap];0.92[JPT][hapmap]
rs9925807	0.85[ASN][1000 genomes]
rs9927073	0.84[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.95[TSI][hapmap];0.91[YRI][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9928181	0.86[ASN][1000 genomes]
rs9929483	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9931225	0.83[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.88[MKK][hapmap];0.93[ASN][1000 genomes]
rs9932831	0.90[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap]
rs9938833	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916687	chr16:74241238-74896721	Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
2	nsv949374	chr16:74466960-75172358	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
3	nsv1062517	chr16:74483574-74710623	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv1061095	chr16:74519718-75407020	Strong transcription Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	123 gene(s)	inside rSNPs	diseases
5	esv275138	chr16:74647795-74722907	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
6	esv2760414	chr16:74647795-74741615	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
7	nsv1061948	chr16:74660609-74882915	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	67 gene(s)	inside rSNPs	diseases
8	nsv542957	chr16:74660609-74882915	Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	67 gene(s)	inside rSNPs	diseases
9	nsv906906	chr16:74664743-74805668	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
10	nsv572975	chr16:74677312-74702254	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
11	nsv532560	chr16:74692406-75411912	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	111 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs8055784	RFWD3	cis	Thyroid	GTEx
rs8055784	MLKL	Cis_1M	lymphoblastoid	RTeQTL
rs8055784	RFWD3	cis	Esophagus Mucosa	GTEx
rs8055784	FA2H	cis	cerebellum	SCAN
rs8055784	RFWD3	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:74652200-74699000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr16:74653200-74698800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr16:74653400-74699000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr16:74656800-74699400	Strong transcription	HUES64 Cell Line	embryonic stem cell
5	chr16:74657000-74699200	Strong transcription	HUES48 Cell Line	embryonic stem cell
6	chr16:74657200-74699400	Strong transcription	H1 Cell Line	embryonic stem cell
7	chr16:74657200-74699600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
8	chr16:74657400-74699200	Strong transcription	HUES6 Cell Line	embryonic stem cell
9	chr16:74657400-74699600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
10	chr16:74678600-74699800	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr16:74685000-74700000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr16:74685800-74699400	Genic enhancers	Primary T helper cells fromperipheralblood	blood
13	chr16:74687200-74699800	Weak transcription	Right Atrium	heart
14	chr16:74688000-74699200	Strong transcription	Placenta	Placenta
15	chr16:74688000-74699400	Strong transcription	Fetal Muscle Trunk	muscle
16	chr16:74689000-74698800	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr16:74689200-74699600	Strong transcription	Fetal Intestine Small	intestine
18	chr16:74689200-74699800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr16:74689400-74699200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr16:74689600-74699200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr16:74689800-74699600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr16:74690000-74699400	Genic enhancers	Primary T helper cells PMA-I stimulated	--
23	chr16:74690200-74699000	Strong transcription	Fetal Brain Female	brain
24	chr16:74690400-74698200	Strong transcription	Primary hematopoietic stem cells	blood
25	chr16:74690600-74698200	Strong transcription	Rectal Mucosa Donor 31	rectum
26	chr16:74690600-74698800	Strong transcription	H9 Cell Line	embryonic stem cell
27	chr16:74690600-74699000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr16:74690600-74699000	Strong transcription	Rectal Mucosa Donor 29	rectum
29	chr16:74690800-74699000	Strong transcription	Osteobl	bone
30	chr16:74691600-74699200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr16:74691600-74699200	Strong transcription	Fetal Lung	lung
32	chr16:74691600-74699200	Strong transcription	NH-A	brain
33	chr16:74691800-74698000	Strong transcription	Muscle Satellite Cultured Cells	--
34	chr16:74692000-74698000	Strong transcription	HSMM	muscle
35	chr16:74692000-74698200	Strong transcription	Brain Hippocampus Middle	brain
36	chr16:74692000-74699200	Strong transcription	Ovary	ovary
37	chr16:74692000-74699200	Strong transcription	Sigmoid Colon	Sigmoid Colon
38	chr16:74692000-74699400	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr16:74692200-74699200	Strong transcription	iPS-15b Cell Line	embryonic stem cell
40	chr16:74692400-74698800	Strong transcription	Primary neutrophils fromperipheralblood	blood
41	chr16:74692400-74698800	Strong transcription	Lung	lung
42	chr16:74692400-74698800	Strong transcription	HUVEC	blood vessel
43	chr16:74692400-74699000	Strong transcription	Adipose Nuclei	Adipose
44	chr16:74692400-74699800	Weak transcription	Stomach Mucosa	stomach
45	chr16:74692600-74699000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr16:74692600-74699000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr16:74692600-74699000	Strong transcription	Skeletal Muscle Female	skeletal muscle
48	chr16:74692600-74699400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
49	chr16:74692800-74698800	Strong transcription	Liver	Liver
50	chr16:74692800-74699000	Strong transcription	Brain Anterior Caudate	brain

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