Variant report

Variant	rs7221293
Chromosome Location	chr17:63271421-63271422
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs2869589	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73331813	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73336296	0.81[AFR][1000 genomes]
rs73349118	0.93[AFR][1000 genomes]
rs73349164	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8067471	1.00[EUR][1000 genomes]
rs9902192	1.00[EUR][1000 genomes]
rs9903325	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530764	chr17:62939944-63278472	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv482610	chr17:63214370-63372334	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63267400-63273400	Weak transcription	Fetal Thymus	thymus
2	chr17:63267400-63274600	Weak transcription	Fetal Brain Female	brain
3	chr17:63267800-63273000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr17:63267800-63273200	Weak transcription	Fetal Stomach	stomach
5	chr17:63267800-63273600	Weak transcription	Placenta	Placenta
6	chr17:63267800-63273800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr17:63271200-63273200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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