Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:39466848..39468476-chr19:39486869..39489506,3	K562	blood:
2	chr19:39488364..39491166-chr19:39520931..39523537,2	K562	blood:

Variant related genes	Relation type
ENSG00000161243	Chromatin interaction
ENSG00000267992	Chromatin interaction

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1062261	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10853723	0.83[ASN][1000 genomes]
rs1139251	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11673044	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11673637	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12610200	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12610248	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12982199	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12982529	0.80[ASN][1000 genomes]
rs12985447	0.80[ASN][1000 genomes]
rs1654334	0.81[AMR][1000 genomes]
rs4802007	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4803181	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs622528	0.82[AMR][1000 genomes]
rs637972	0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs650027	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6508835	0.80[ASN][1000 genomes]
rs6508836	0.83[ASN][1000 genomes]
rs6508837	0.80[ASN][1000 genomes]
rs6508839	0.80[ASN][1000 genomes]
rs6508840	0.80[ASN][1000 genomes]
rs7246595	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7246678	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7259473	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8100503	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8109176	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs7246775	FBXO27	cis	Skin Sun Exposed Lower leg	GTEx
rs7246775	FBXO27	cis	Esophagus Mucosa	GTEx
rs7246775	CTB-189B5.3	cis	Skin Sun Exposed Lower leg	GTEx
rs7246775	CTB-189B5.3	cis	Esophagus Mucosa	GTEx

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39480000-39503400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:39481000-39516000	Weak transcription	Brain Angular Gyrus	brain
3	chr19:39487200-39518200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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