Variant report

Variant rs7250208
Chromosome Location chr19:52464204-52464205
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52449600-52468000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr19:52457400-52464600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr19:52457600-52467600 Weak transcription H1 Cell Line embryonic stem cell
4 chr19:52460000-52464400 Weak transcription Stomach Smooth Muscle stomach
5 chr19:52460200-52464800 Weak transcription Brain Germinal Matrix brain
6 chr19:52460400-52464800 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr19:52460400-52465800 Enhancers HepG2 liver
8 chr19:52461800-52465600 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr19:52461800-52466800 Weak transcription Fetal Kidney kidney
10 chr19:52462200-52464600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr19:52462800-52464800 Weak transcription Dnd41 blood
12 chr19:52462800-52466400 Weak transcription Brain Angular Gyrus brain
13 chr19:52463000-52464800 Enhancers K562 blood
14 chr19:52463200-52465400 Weak transcription Fetal Brain Female brain
15 chr19:52463400-52464400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr19:52463400-52465000 Weak transcription Brain Anterior Caudate brain
17 chr19:52463400-52465200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr19:52463400-52465200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr19:52463400-52465400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr19:52463400-52465600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
21 chr19:52463400-52488200 ZNF genes & repeats Adipose Nuclei Adipose
22 chr19:52463400-52488800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr19:52463400-52489000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
24 chr19:52463600-52464800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr19:52463800-52464400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr19:52463800-52488200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
27 chr19:52464000-52464400 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr19:52464000-52464600 Weak transcription Fetal Lung lung
29 chr19:52464000-52464800 Enhancers Fetal Heart heart
30 chr19:52464000-52467600 Weak transcription Fetal Muscle Trunk muscle
31 chr19:52464000-52468000 Weak transcription Right Ventricle heart
32 chr19:52464200-52465200 Weak transcription Left Ventricle heart
33 chr19:52464200-52466400 Weak transcription Placenta Placenta
34 chr19:52464200-52467600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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