The 2.0 version of rSNPBase

Variant report

Variant rs7259368
Chromosome Location chr19:21370826-21370827
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21331000-21371000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:21333000-21373000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:21355200-21371000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:21360000-21371200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr19:21360400-21371200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr19:21363800-21372000 Weak transcription Gastric stomach
7 chr19:21363800-21374000 Weak transcription Pancreas Pancrea
8 chr19:21365200-21373200 Strong transcription HSMM muscle
9 chr19:21365800-21374400 Weak transcription Hela-S3 cervix
10 chr19:21366200-21371200 Strong transcription Dnd41 blood
11 chr19:21366400-21380400 Weak transcription Placenta Amnion Placenta Amnion
12 chr19:21366800-21371000 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr19:21367000-21371600 Weak transcription Fetal Kidney kidney
14 chr19:21367000-21377200 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr19:21367000-21377800 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr19:21367000-21379200 Weak transcription Ovary ovary
17 chr19:21367000-21380600 Weak transcription Placenta Placenta
18 chr19:21367200-21371600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr19:21367200-21374400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr19:21367200-21374400 Weak transcription Fetal Muscle Leg muscle
21 chr19:21367200-21375600 Weak transcription H1 Cell Line embryonic stem cell
22 chr19:21367200-21377600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr19:21367200-21377600 Weak transcription Left Ventricle heart
24 chr19:21367400-21371400 Weak transcription Brain Cingulate Gyrus brain
25 chr19:21367400-21372200 Weak transcription NH-A brain
26 chr19:21367400-21379800 Weak transcription K562 blood
27 chr19:21367800-21373800 Weak transcription HSMMtube muscle
28 chr19:21368400-21372000 Weak transcription Primary B cells from cord blood blood
29 chr19:21368400-21373200 Weak transcription Primary T cells from cord blood blood
30 chr19:21368600-21374600 Weak transcription Fetal Brain Female brain
31 chr19:21368600-21374600 Weak transcription Fetal Lung lung
32 chr19:21368600-21378000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr19:21368800-21372000 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr19:21369000-21372000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr19:21369000-21375800 Weak transcription Fetal Stomach stomach
36 chr19:21369200-21372400 Weak transcription Fetal Muscle Trunk muscle
37 chr19:21369200-21373200 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr19:21369200-21375200 Weak transcription Primary hematopoietic stem cells blood
39 chr19:21369400-21374200 Weak transcription Muscle Satellite Cultured Cells --
40 chr19:21369400-21374600 Weak transcription Brain Germinal Matrix brain
41 chr19:21369600-21371000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
42 chr19:21369600-21371600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr19:21369600-21377600 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr19:21369800-21372200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr19:21370000-21371000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
46 chr19:21370000-21371000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
47 chr19:21370000-21371000 ZNF genes & repeats Lung lung
48 chr19:21370000-21372200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr19:21370000-21372400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr19:21370000-21380000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015