Variant report

Variant	rs72633943
Chromosome Location	chr8:49056854-49056855
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11776380	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11778329	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11781302	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11783856	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13272393	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6991823	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72633941	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72633944	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931032	chr8:48744329-49091359	Strong transcription Flanking Active TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49051800-49058000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:49051800-49065800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:49054000-49059200	Weak transcription	Adipose Nuclei	Adipose
4	chr8:49054000-49059200	Weak transcription	HMEC	breast
5	chr8:49054400-49059200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr8:49054400-49059200	Weak transcription	Fetal Lung	lung
7	chr8:49054400-49059200	Weak transcription	NHEK	skin
8	chr8:49054600-49058000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr8:49054800-49059200	Weak transcription	NHDF-Ad	bronchial
10	chr8:49054800-49059200	Weak transcription	Osteobl	bone
11	chr8:49054800-49059400	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr8:49055000-49058000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr8:49055000-49058200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr8:49056200-49066000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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