Variant report
| Variant | rs72646678 |
|---|---|
| Chromosome Location | chr5:5454443-5454444 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:5430200-5478800 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr5:5430800-5460800 | Weak transcription | Fetal Heart | heart |
| 3 | chr5:5433200-5456800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 4 | chr5:5433400-5495200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 5 | chr5:5433600-5455400 | Weak transcription | Small Intestine | intestine |
| 6 | chr5:5434000-5460000 | Weak transcription | Psoas Muscle | Psoas |
| 7 | chr5:5436600-5468400 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 8 | chr5:5436600-5470600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 9 | chr5:5436600-5471400 | Strong transcription | Hela-S3 | cervix |
| 10 | chr5:5436600-5478200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 11 | chr5:5436800-5470400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 12 | chr5:5436800-5470600 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 13 | chr5:5437200-5470600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 14 | chr5:5437200-5477000 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 15 | chr5:5437400-5470800 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 16 | chr5:5437400-5480000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr5:5437600-5470600 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 18 | chr5:5437800-5470600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 19 | chr5:5439600-5470600 | Strong transcription | Dnd41 | blood |
| 20 | chr5:5440000-5470600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 21 | chr5:5440600-5456800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 22 | chr5:5440800-5460200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 23 | chr5:5440800-5471600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 24 | chr5:5441200-5468800 | Strong transcription | Liver | Liver |
| 25 | chr5:5441400-5468400 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 26 | chr5:5441400-5468800 | Strong transcription | Adipose Nuclei | Adipose |
| 27 | chr5:5441400-5469000 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 28 | chr5:5441400-5470400 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 29 | chr5:5441600-5459600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 30 | chr5:5441600-5465200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 31 | chr5:5441600-5468800 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 32 | chr5:5441600-5469000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 33 | chr5:5441600-5470600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 34 | chr5:5442400-5475800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 35 | chr5:5445000-5457800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 36 | chr5:5445200-5454600 | Weak transcription | NHLF | lung |
| 37 | chr5:5445200-5457000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 38 | chr5:5445200-5457400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 39 | chr5:5446600-5457000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 40 | chr5:5446600-5457000 | Weak transcription | Pancreas | Pancrea |
| 41 | chr5:5446600-5457000 | Weak transcription | Spleen | Spleen |
| 42 | chr5:5446600-5457600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 43 | chr5:5446600-5458400 | Weak transcription | Esophagus | oesophagus |
| 44 | chr5:5446600-5458400 | Weak transcription | Gastric | stomach |
| 45 | chr5:5446800-5457000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 46 | chr5:5446800-5467000 | Strong transcription | NH-A | brain |
| 47 | chr5:5447000-5457000 | Weak transcription | Fetal Intestine Small | intestine |
| 48 | chr5:5447800-5457000 | Weak transcription | Right Ventricle | heart |
| 49 | chr5:5448600-5454600 | Weak transcription | Fetal Brain Female | brain |
| 50 | chr5:5448800-5470400 | Strong transcription | Primary B cells from cord blood | blood |
