The 2.0 version of rSNPBase

Variant report

Variant rs72649975
Chromosome Location chr1:211702945-211702946
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211689400-211715000 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:211699400-211705600 Enhancers Fetal Muscle Trunk muscle
3 chr1:211699800-211705600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:211700200-211705200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:211700200-211705800 Enhancers Fetal Muscle Leg muscle
6 chr1:211700400-211703200 Enhancers Skeletal Muscle Female skeletal muscle
7 chr1:211700400-211705600 Enhancers Adipose Nuclei Adipose
8 chr1:211700400-211705600 Enhancers Brain Anterior Caudate brain
9 chr1:211701000-211704400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:211701400-211703200 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr1:211701400-211704000 Enhancers Hela-S3 cervix
12 chr1:211701400-211704200 Enhancers GM12878-XiMat blood
13 chr1:211701600-211703800 Weak transcription Right Ventricle heart
14 chr1:211701600-211711000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:211701800-211703000 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:211701800-211712400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:211702000-211703800 Weak transcription Right Atrium heart
18 chr1:211702200-211703200 Enhancers Aorta Aorta
19 chr1:211702400-211703400 Enhancers Esophagus oesophagus
20 chr1:211702400-211703400 Enhancers Left Ventricle heart
21 chr1:211702400-211703400 Enhancers Psoas Muscle Psoas
22 chr1:211702400-211703600 Enhancers Liver Liver
23 chr1:211702400-211703600 Enhancers Brain Angular Gyrus brain
24 chr1:211702400-211703800 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:211702400-211703800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:211702400-211703800 Enhancers K562 blood
27 chr1:211702400-211704400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:211702600-211703000 Enhancers HSMMtube muscle
29 chr1:211702600-211703200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr1:211702600-211703400 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:211702600-211704000 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr1:211702600-211711600 Weak transcription Spleen Spleen
33 chr1:211702800-211703200 Bivalent Enhancer Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:211702800-211703200 Enhancers HMEC breast
35 chr1:211702800-211703200 Bivalent Enhancer NHEK skin
36 chr1:211702800-211703800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:211702800-211705400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015