Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr20:16216245..16219202-chr20:16220225..16222691,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1884604	1.00[JPT][hapmap]
rs1884605	1.00[JPT][hapmap]
rs1884606	1.00[JPT][hapmap]
rs2144883	1.00[JPT][hapmap]
rs2328019	1.00[JPT][hapmap]
rs56223133	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56403879	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6034439	1.00[JPT][hapmap]
rs6043852	1.00[JPT][hapmap]
rs6043854	1.00[JPT][hapmap]
rs6043882	1.00[JPT][hapmap]
rs6043887	1.00[JPT][hapmap]
rs6043892	1.00[JPT][hapmap]
rs60570311	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67375692	1.00[EUR][1000 genomes]
rs73104250	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73104255	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73104272	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73104280	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73104292	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73104300	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73106376	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73106399	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73108306	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73108386	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833930	chr20:16134347-16302763	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:16215600-16218200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr20:16216000-16218000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr20:16216200-16218200	Enhancers	Brain Germinal Matrix	brain
4	chr20:16216600-16218600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr20:16217000-16218000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr20:16217400-16226800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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