The 2.0 version of rSNPBase

Variant report

Variant rs72672226
Chromosome Location chr1:58984643-58984644
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:58931200-59010800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:58933800-58984800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:58934800-58994000 Weak transcription HSMM muscle
4 chr1:58946400-58993800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:58953200-58986000 Weak transcription Colonic Mucosa Colon
6 chr1:58953600-58999200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:58955000-58986400 Weak transcription Gastric stomach
8 chr1:58955000-58988200 Weak transcription Fetal Muscle Trunk muscle
9 chr1:58963800-58999000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:58964800-58986400 Weak transcription K562 blood
11 chr1:58966600-59010600 Weak transcription Placenta Placenta
12 chr1:58967600-59010600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:58968200-58986400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:58974600-58987600 Weak transcription Right Ventricle heart
15 chr1:58974800-58984800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:58974800-58991600 Weak transcription Esophagus oesophagus
17 chr1:58974800-59005000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:58974800-59010800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr1:58974800-59011800 Weak transcription Spleen Spleen
20 chr1:58975000-59010600 Weak transcription Stomach Smooth Muscle stomach
21 chr1:58975000-59010800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr1:58977000-58993000 Strong transcription Primary T cells fromperipheralblood blood
23 chr1:58977200-58994000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:58977200-59005000 Weak transcription Rectal Smooth Muscle rectum
25 chr1:58977200-59010800 Weak transcription Brain Angular Gyrus brain
26 chr1:58977200-59011400 Weak transcription Ovary ovary
27 chr1:58977400-58984800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:58977400-58987400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:58977400-58988600 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr1:58977400-58989400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:58977400-58990200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:58977400-58990200 Weak transcription Fetal Kidney kidney
33 chr1:58977400-58994200 Weak transcription Fetal Lung lung
34 chr1:58977400-58994200 Weak transcription Fetal Thymus thymus
35 chr1:58977400-58994400 Weak transcription Thymus Thymus
36 chr1:58977400-58996200 Weak transcription Fetal Stomach stomach
37 chr1:58977400-58999000 Weak transcription Fetal Muscle Leg muscle
38 chr1:58977400-59005400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:58977400-59008600 Weak transcription Brain Anterior Caudate brain
40 chr1:58977400-59010400 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:58977400-59010600 Weak transcription Aorta Aorta
42 chr1:58977400-59010600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr1:58977400-59010600 Weak transcription Psoas Muscle Psoas
44 chr1:58977400-59011400 Weak transcription Left Ventricle heart
45 chr1:58977400-59011400 Weak transcription Lung lung
46 chr1:58977600-58988600 Weak transcription Colon Smooth Muscle Colon
47 chr1:58977600-58988600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:58977600-59011000 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:58978200-59010200 Weak transcription Dnd41 blood
50 chr1:58978400-58991800 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015