Variant report

Variant	rs72696037
Chromosome Location	chr1:165573299-165573300
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs17408514	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17448848	1.00[AFR][1000 genomes]
rs41267558	1.00[AMR][1000 genomes]
rs72692034	1.00[AMR][1000 genomes]
rs72696033	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72696036	0.95[EUR][1000 genomes]
rs72696040	1.00[EUR][1000 genomes]
rs72696057	1.00[EUR][1000 genomes]
rs9333470	1.00[EUR][1000 genomes]
rs9333475	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429902	chr1:165531342-165574342	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165568000-165574800	Weak transcription	Right Atrium	heart
2	chr1:165568200-165579600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr1:165573000-165573600	Enhancers	HepG2	liver
4	chr1:165573000-165573800	Enhancers	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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