Variant report

Variant	rs72696036
Chromosome Location	chr1:165573251-165573252
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1337446	0.87[ASN][1000 genomes]
rs17408514	0.95[EUR][1000 genomes]
rs1981167	1.00[AFR][1000 genomes]
rs4290038	1.00[AFR][1000 genomes]
rs72696033	0.95[EUR][1000 genomes]
rs72696037	0.95[EUR][1000 genomes]
rs72696040	0.95[EUR][1000 genomes]
rs72696057	0.95[EUR][1000 genomes]
rs73027030	0.93[ASN][1000 genomes]
rs73027048	0.87[ASN][1000 genomes]
rs9333367	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs9333376	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs9333389	1.00[AFR][1000 genomes]
rs9333393	1.00[AFR][1000 genomes]
rs9333394	1.00[AFR][1000 genomes]
rs9333397	1.00[AFR][1000 genomes]
rs9333405	1.00[AFR][1000 genomes]
rs9333414	1.00[AFR][1000 genomes]
rs9333417	1.00[AFR][1000 genomes]
rs9333419	1.00[AFR][1000 genomes]
rs9333421	1.00[AFR][1000 genomes]
rs9333424	1.00[AFR][1000 genomes]
rs9333425	1.00[AFR][1000 genomes]
rs9333426	1.00[AFR][1000 genomes]
rs9333427	1.00[AFR][1000 genomes]
rs9333428	1.00[AFR][1000 genomes]
rs9333429	1.00[AFR][1000 genomes]
rs9333430	1.00[AFR][1000 genomes]
rs9333431	1.00[AFR][1000 genomes]
rs9333434	1.00[AFR][1000 genomes]
rs9333435	1.00[AFR][1000 genomes]
rs9333437	1.00[AFR][1000 genomes]
rs9333470	0.95[EUR][1000 genomes]
rs9333472	1.00[AFR][1000 genomes]
rs9333475	0.95[EUR][1000 genomes]
rs952375	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429902	chr1:165531342-165574342	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165568000-165574800	Weak transcription	Right Atrium	heart
2	chr1:165568200-165579600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr1:165573000-165573600	Enhancers	HepG2	liver
4	chr1:165573000-165573800	Enhancers	Liver	Liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links