Variant report

Variant rs72711148
Chromosome Location chr1:175853796-175853797
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175843000-175855000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:175847600-175857000 Weak transcription Fetal Lung lung
3 chr1:175848200-175856800 Weak transcription Adipose Nuclei Adipose
4 chr1:175848400-175862600 Weak transcription Fetal Intestine Small intestine
5 chr1:175851000-175854000 Weak transcription Brain Germinal Matrix brain
6 chr1:175851200-175853800 Weak transcription Fetal Brain Female brain
7 chr1:175851200-175854400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:175851200-175854400 Weak transcription Fetal Brain Male brain
9 chr1:175851800-175854400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:175851800-175854600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:175851800-175857400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:175852600-175855200 Enhancers Aorta Aorta
13 chr1:175852600-175855400 Enhancers Brain Angular Gyrus brain
14 chr1:175853000-175855400 Enhancers Brain Hippocampus Middle brain
15 chr1:175853200-175855800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:175853200-175857600 Enhancers Brain Substantia Nigra brain
17 chr1:175853400-175853800 Flanking Active TSS Brain Inferior Temporal Lobe brain
18 chr1:175853400-175855200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:175853400-175855200 Enhancers Brain Anterior Caudate brain
20 chr1:175853400-175855400 Enhancers Brain Cingulate Gyrus brain
21 chr1:175853400-175855400 Enhancers Lung lung
22 chr1:175853400-175855800 Enhancers Cortex derived primary cultured neurospheres brain
23 chr1:175853600-175855400 Enhancers Fetal Stomach stomach
24 chr1:175853600-175858000 Enhancers Brain Dorsolateral Prefrontal Cortex brain

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