The 2.0 version of rSNPBase

Variant report

Variant rs72713231
Chromosome Location chr1:175882159-175882160
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175863200-175906400 Weak transcription Muscle Satellite Cultured Cells --
2 chr1:175874400-175945600 Weak transcription A549 lung
3 chr1:175875000-175882800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr1:175877400-175894600 Weak transcription HSMM muscle
5 chr1:175877800-175902400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:175879400-175882600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:175879800-175896000 Weak transcription Fetal Stomach stomach
8 chr1:175880000-175897200 Weak transcription Fetal Muscle Trunk muscle
9 chr1:175880000-175897400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:175880000-175937800 Weak transcription HSMMtube muscle
11 chr1:175880200-175883200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:175880200-175883400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:175880200-175885400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:175880400-175882400 Weak transcription Lung lung
15 chr1:175880400-175891800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:175880400-175904400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:175880600-175896200 Weak transcription Placenta Placenta
18 chr1:175880600-175896400 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:175881000-175897200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:175881000-175905200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:175881000-175924200 Weak transcription Brain Angular Gyrus brain
22 chr1:175881200-175894800 Weak transcription Primary T cells from cord blood blood
23 chr1:175881400-175889400 Weak transcription Brain Germinal Matrix brain
24 chr1:175881400-175893400 Weak transcription GM12878-XiMat blood
25 chr1:175881400-175894800 Weak transcription Fetal Muscle Leg muscle
26 chr1:175881400-175896600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:175881400-175897400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:175881800-175882400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
29 chr1:175882000-175882200 Bivalent Enhancer H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr1:175882000-175882400 Enhancers Aorta Aorta
31 chr1:175882000-175883000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:175882000-175895000 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015