The 2.0 version of rSNPBase

Variant report

Variant rs72713225
Chromosome Location chr1:175869789-175869790
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175855000-175870600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:175855200-175879400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:175855400-175879400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:175857200-175875800 Weak transcription Brain Germinal Matrix brain
5 chr1:175857600-175879400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:175858200-175879400 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr1:175858800-175876800 Weak transcription HSMM muscle
8 chr1:175858800-175879400 Weak transcription Fetal Muscle Trunk muscle
9 chr1:175858800-175879400 Weak transcription HSMMtube muscle
10 chr1:175859200-175879400 Weak transcription Fetal Muscle Leg muscle
11 chr1:175862400-175879400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:175863000-175871600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:175863200-175906400 Weak transcription Muscle Satellite Cultured Cells --
14 chr1:175863400-175879400 Weak transcription Primary T cells from cord blood blood
15 chr1:175864800-175878000 Weak transcription Fetal Brain Female brain
16 chr1:175865000-175871400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:175865000-175871400 Weak transcription Aorta Aorta
18 chr1:175865200-175879400 Weak transcription Fetal Lung lung
19 chr1:175865400-175879400 Weak transcription Fetal Stomach stomach
20 chr1:175865800-175871400 Weak transcription Pancreas Pancrea
21 chr1:175866600-175876200 Weak transcription Ovary ovary
22 chr1:175866800-175871600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:175868200-175877000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:175869000-175870000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:175869000-175870800 Weak transcription Spleen Spleen
26 chr1:175869600-175879400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015