Variant report

Variant	rs72714290
Chromosome Location	chr8:130561611-130561612
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr17:15903080..15903997-chr8:130561033..130561639,2	NB4	blood:
2	chr8:130548153..130550436-chr8:130561567..130563601,2	K562	blood:
3	chr8:130560404..130562834-chr8:130584405..130585916,2	K562	blood:

Variant related genes	Relation type
ENSG00000011295	Chromatin interaction

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10505541	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10505542	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11774619	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11786259	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2196074	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35574031	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66791054	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72714284	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72714286	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72714289	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7812646	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130556800-130568000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr8:130557800-130568600	Genic enhancers	K562	blood
3	chr8:130558000-130562600	Enhancers	Primary hematopoietic stem cells	blood
4	chr8:130558200-130563000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr8:130558200-130564200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr8:130558200-130564600	Enhancers	Primary B cells from peripheral blood	blood
7	chr8:130558600-130563000	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr8:130559200-130564400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr8:130559400-130563400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr8:130560000-130564000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr8:130560000-130564000	Weak transcription	Brain Hippocampus Middle	brain
12	chr8:130560200-130564000	Enhancers	Primary B cells from cord blood	blood
13	chr8:130560400-130564600	Genic enhancers	Dnd41	blood
14	chr8:130560400-130565400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr8:130560800-130562400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr8:130560800-130565000	Enhancers	Liver	Liver
17	chr8:130561000-130563600	Weak transcription	Fetal Thymus	thymus
18	chr8:130561000-130564400	Weak transcription	Left Ventricle	heart
19	chr8:130561000-130565400	Enhancers	Primary hematopoietic stem cells short term culture	blood
20	chr8:130561600-130562600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
21	chr8:130561600-130563600	Flanking Active TSS	GM12878-XiMat	blood
22	chr8:130561600-130565400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr8:130561600-130565600	Enhancers	Thymus	Thymus

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