Variant report

Variant	rs72731783
Chromosome Location	chr9:73729393-73729394
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17521958	0.82[EUR][1000 genomes]
rs34975390	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35683807	0.82[ASN][1000 genomes]
rs7027234	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72731779	0.80[EUR][1000 genomes]
rs72731780	0.80[EUR][1000 genomes]
rs972386	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035505	chr9:73709852-73934353	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73720400-73735200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:73727000-73730200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr9:73728000-73736000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr9:73728200-73730000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr9:73728200-73730000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr9:73728200-73730600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr9:73728400-73730000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr9:73728400-73730200	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr9:73728400-73730200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr9:73728400-73730400	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr9:73728400-73730600	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr9:73728400-73734600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr9:73728600-73730000	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr9:73728600-73730200	Weak transcription	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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