Variant report

Variant	rs72732594
Chromosome Location	chr5:36816265-36816266
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs55702678	0.90[EUR][1000 genomes]
rs55712022	0.90[EUR][1000 genomes]
rs55739939	0.90[EUR][1000 genomes]
rs55886401	0.90[EUR][1000 genomes]
rs56065778	0.90[EUR][1000 genomes]
rs56272083	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56332781	0.90[EUR][1000 genomes]
rs72732600	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72732601	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72734604	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72734607	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72734609	0.90[EUR][1000 genomes]
rs72734610	0.90[EUR][1000 genomes]
rs72734611	0.90[EUR][1000 genomes]
rs72734612	0.86[EUR][1000 genomes]
rs72734671	0.90[EUR][1000 genomes]
rs72734672	0.90[EUR][1000 genomes]
rs72734673	0.90[EUR][1000 genomes]
rs72734677	0.90[EUR][1000 genomes]
rs72734681	0.86[EUR][1000 genomes]
rs72734682	0.90[EUR][1000 genomes]
rs72734685	0.90[EUR][1000 genomes]
rs72734687	0.90[EUR][1000 genomes]
rs72734688	0.90[EUR][1000 genomes]
rs72734697	0.90[EUR][1000 genomes]
rs72734700	0.82[EUR][1000 genomes]
rs72736704	0.90[EUR][1000 genomes]
rs72736710	0.90[EUR][1000 genomes]
rs72736712	0.90[EUR][1000 genomes]
rs72736713	0.90[EUR][1000 genomes]
rs72736714	0.90[EUR][1000 genomes]
rs72736717	0.90[EUR][1000 genomes]
rs72736721	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492319	chr5:36570707-37061019	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv527961	chr5:36781051-36828730	Enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv525478	chr5:36804225-37349895	Strong transcription Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36816000-36816400	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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