Variant report

Variant	rs72743309
Chromosome Location	chr1:217278937-217278938
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11572466	1.00[ASN][1000 genomes]
rs1416536	1.00[ASN][1000 genomes]
rs1561188	1.00[ASN][1000 genomes]
rs17607502	1.00[ASN][1000 genomes]
rs1816566	1.00[ASN][1000 genomes]
rs1890556	1.00[ASN][1000 genomes]
rs2185223	1.00[ASN][1000 genomes]
rs2185224	1.00[ASN][1000 genomes]
rs2576213	1.00[ASN][1000 genomes]
rs2789559	1.00[ASN][1000 genomes]
rs2789575	1.00[ASN][1000 genomes]
rs2818766	1.00[ASN][1000 genomes]
rs2818767	1.00[ASN][1000 genomes]
rs2818770	1.00[ASN][1000 genomes]
rs2818771	1.00[ASN][1000 genomes]
rs2818787	1.00[ASN][1000 genomes]
rs72741502	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72743311	1.00[ASN][1000 genomes]
rs9441614	1.00[ASN][1000 genomes]
rs946437	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428610	chr1:217143317-217307243	Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217278800-217279400	Enhancers	Pancreas	Pancrea
2	chr1:217278800-217279800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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