Variant report

Variant	rs1816566
Chromosome Location	chr1:217134876-217134877
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:217134795..217135296-chr1:217920370..217921166,2	MCF-7	breast:
2	chr1:217134497..217135535-chr1:217507001..217507878,7	MCF-7	breast:
3	chr1:217134480..217137377-chr1:217143582..217146918,3	MCF-7	breast:
4	chr1:217134808..217135638-chr1:217505825..217506636,3	MCF-7	breast:
5	chr1:217134777..217135540-chr1:217566906..217567785,3	MCF-7	breast:
6	chr1:217134859..217135817-chr1:217833555..217834379,2	MCF-7	breast:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11572466	1.00[ASN][1000 genomes]
rs11572587	1.00[ASN][1000 genomes]
rs1416536	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1561188	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17607502	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1890556	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2185223	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2185224	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2576213	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2789559	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2789575	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2818766	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2818767	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2818770	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2818771	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2818787	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2818796	0.81[AFR][1000 genomes]
rs72741502	1.00[ASN][1000 genomes]
rs72743309	1.00[ASN][1000 genomes]
rs72743311	1.00[ASN][1000 genomes]
rs9441614	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs946437	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217122400-217146200	Weak transcription	Pancreas	Pancrea
2	chr1:217125200-217135400	Weak transcription	Fetal Heart	heart
3	chr1:217134200-217135200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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