Variant report

Variant rs72784689
Chromosome Location chr5:90470446-90470447
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:90442400-90471600 Weak transcription Brain Germinal Matrix brain
2 chr5:90446200-90471600 Weak transcription H1 Cell Line embryonic stem cell
3 chr5:90446200-90472200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr5:90459000-90471800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr5:90459200-90471600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:90462600-90473800 Weak transcription Osteobl bone
7 chr5:90465600-90473400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr5:90466400-90471800 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr5:90466600-90471400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr5:90466600-90471600 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr5:90466600-90471600 Weak transcription Placenta Amnion Placenta Amnion
12 chr5:90467600-90471400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr5:90467600-90485600 Weak transcription Fetal Intestine Small intestine
14 chr5:90468000-90471600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr5:90468000-90471600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr5:90468000-90473200 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr5:90468000-90478400 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr5:90468200-90471600 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr5:90468200-90471600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr5:90468200-90472600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr5:90470000-90470800 Enhancers Duodenum Smooth Muscle Duodenum
22 chr5:90470000-90470800 Enhancers Fetal Stomach stomach
23 chr5:90470000-90470800 Enhancers Rectal Smooth Muscle rectum
24 chr5:90470000-90473200 Enhancers Colon Smooth Muscle Colon
25 chr5:90470400-90470600 Enhancers Cortex derived primary cultured neurospheres brain
26 chr5:90470400-90470800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:90470400-90470800 Active TSS Fetal Kidney kidney

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