The 2.0 version of rSNPBase

Variant report

Variant rs62376490
Chromosome Location chr5:90350502-90350503
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:90341200-90376600 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr5:90344400-90353800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr5:90344800-90368000 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr5:90348200-90350800 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr5:90348200-90351000 Enhancers Primary monocytes fromperipheralblood blood
6 chr5:90348400-90351600 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr5:90349400-90354000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr5:90349600-90354000 Weak transcription Fetal Intestine Large intestine
9 chr5:90349600-90354000 Weak transcription A549 lung
10 chr5:90349600-90358400 Weak transcription Fetal Kidney kidney
11 chr5:90349800-90350600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr5:90349800-90350600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr5:90349800-90353800 Weak transcription Colon Smooth Muscle Colon
14 chr5:90349800-90354000 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr5:90349800-90354200 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr5:90350000-90354000 Weak transcription Rectal Smooth Muscle rectum
17 chr5:90350400-90350600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
18 chr5:90350400-90352400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015