The 2.0 version of rSNPBase

Variant report

Variant rs72784702
Chromosome Location chr5:90486566-90486567
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:90480200-90487000 Enhancers Primary neutrophils fromperipheralblood blood
2 chr5:90485200-90486600 Flanking Active TSS A549 lung
3 chr5:90485200-90487000 Enhancers Placenta Amnion Placenta Amnion
4 chr5:90485400-90486600 Enhancers Cortex derived primary cultured neurospheres brain
5 chr5:90485400-90486600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
6 chr5:90485400-90486800 Enhancers Placenta Placenta
7 chr5:90485400-90487000 Enhancers Small Intestine intestine
8 chr5:90485600-90486600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
9 chr5:90485600-90486600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr5:90485600-90486800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr5:90485600-90486800 Enhancers Fetal Intestine Small intestine
12 chr5:90485800-90486600 Flanking Active TSS Rectal Smooth Muscle rectum
13 chr5:90485800-90486600 Enhancers Hela-S3 cervix
14 chr5:90485800-90486800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr5:90485800-90486800 Enhancers Lung lung
16 chr5:90486000-90487600 Enhancers NHLF lung
17 chr5:90486200-90486600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr5:90486200-90486600 Enhancers Muscle Satellite Cultured Cells --
19 chr5:90486200-90486600 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr5:90486200-90486600 Enhancers Skeletal Muscle Male skeletal muscle
21 chr5:90486200-90486600 Enhancers HSMM muscle
22 chr5:90486200-90486800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr5:90486200-90486800 Enhancers NH-A brain
24 chr5:90486200-90487000 Enhancers Primary monocytes fromperipheralblood blood
25 chr5:90486200-90487000 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr5:90486200-90487600 Enhancers Colon Smooth Muscle Colon
27 chr5:90486200-90487800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr5:90486400-90486800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr5:90486400-90486800 Enhancers Stomach Smooth Muscle stomach
30 chr5:90486400-90486800 Enhancers Osteobl bone
31 chr5:90486400-90487000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr5:90486400-90487000 Enhancers Adipose Nuclei Adipose
33 chr5:90486400-90487200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr5:90486400-90487600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr5:90486400-90487800 Enhancers NHDF-Ad bronchial
36 chr5:90486400-90488400 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr5:90486400-90489400 Weak transcription Fetal Intestine Large intestine
38 chr5:90486400-90490400 Weak transcription Fetal Muscle Leg muscle
39 chr5:90486400-90490400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr5:90486400-90490800 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015