Variant report

Variant rs72786624
Chromosome Location chr2:10198262-10198263
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10185000-10200400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:10189000-10200000 Weak transcription Psoas Muscle Psoas
3 chr2:10192800-10200600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr2:10193600-10200200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr2:10193600-10200400 Weak transcription Brain Hippocampus Middle brain
6 chr2:10193600-10218400 Weak transcription Brain Angular Gyrus brain
7 chr2:10194000-10205600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr2:10194400-10200400 Weak transcription Brain Substantia Nigra brain
9 chr2:10194400-10203000 Weak transcription Aorta Aorta
10 chr2:10194600-10200600 Weak transcription Brain Anterior Caudate brain
11 chr2:10194600-10215600 Weak transcription Fetal Kidney kidney
12 chr2:10194800-10200400 Weak transcription Fetal Brain Female brain
13 chr2:10195400-10200000 Weak transcription Liver Liver
14 chr2:10195400-10200400 Weak transcription Brain Cingulate Gyrus brain
15 chr2:10196800-10198400 Enhancers Spleen Spleen
16 chr2:10196800-10198600 Enhancers Lung lung
17 chr2:10197000-10198400 Active TSS ES-WA7 Cell Line embryonic stem cell
18 chr2:10197000-10200200 Weak transcription Left Ventricle heart
19 chr2:10197000-10203800 Weak transcription Gastric stomach
20 chr2:10197200-10198400 Enhancers Stomach Mucosa stomach
21 chr2:10197400-10198400 Flanking Active TSS NHEK skin
22 chr2:10197600-10205400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr2:10197800-10198400 Flanking Active TSS HepG2 liver
24 chr2:10197800-10198400 Enhancers NH-A brain
25 chr2:10197800-10198800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:10197800-10199000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr2:10197800-10199200 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr2:10197800-10200000 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr2:10197800-10200200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr2:10198000-10198400 Enhancers HUES48 Cell Line embryonic stem cell
31 chr2:10198000-10198400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
32 chr2:10198000-10198400 Enhancers HUES64 Cell Line embryonic stem cell
33 chr2:10198000-10198400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:10198000-10198400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
35 chr2:10198000-10198400 Enhancers Colonic Mucosa Colon
36 chr2:10198000-10198400 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr2:10198000-10198400 Enhancers Fetal Intestine Large intestine
38 chr2:10198000-10198400 Genic enhancers Fetal Intestine Small intestine
39 chr2:10198000-10198400 Enhancers Fetal Lung lung
40 chr2:10198000-10198400 Genic enhancers Fetal Stomach stomach
41 chr2:10198000-10198400 Enhancers Placenta Amnion Placenta Amnion
42 chr2:10198000-10198400 Enhancers Rectal Mucosa Donor 31 rectum
43 chr2:10198000-10198600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr2:10198000-10198600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
45 chr2:10198000-10198600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr2:10198000-10198800 Enhancers H1 Cell Line embryonic stem cell
47 chr2:10198000-10199000 Genic enhancers Stomach Smooth Muscle stomach
48 chr2:10198000-10200600 Weak transcription Brain Inferior Temporal Lobe brain
49 chr2:10198000-10201400 Enhancers Fetal Muscle Leg muscle
50 chr2:10198000-10218600 Weak transcription Right Atrium heart

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