Variant report

Variant	rs72832071
Chromosome Location	chr16:81883912-81883913
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:81851613..81854068-chr16:81882143..81884584,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs13335168	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28546769	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28550771	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28609062	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28731296	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55833904	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56134131	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57963515	1.00[ASN][1000 genomes]
rs61635216	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62046684	1.00[AMR][1000 genomes]
rs6564925	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67174651	1.00[ASN][1000 genomes]
rs67283254	1.00[ASN][1000 genomes]
rs68118517	1.00[ASN][1000 genomes]
rs7194131	1.00[ASN][1000 genomes]
rs7204645	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832045	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832046	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832048	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832051	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832057	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832061	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832066	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832068	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832080	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8044282	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8059316	1.00[ASN][1000 genomes]
rs8061071	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9922196	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9923151	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9932427	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9933031	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9940462	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9940492	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948448	chr16:81198147-81906766	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
2	nsv573365	chr16:81804972-81975892	Strong transcription Bivalent/Poised TSS Weak transcription ZNF genes & repeats Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv1065088	chr16:81878481-81953248	Enhancers ZNF genes & repeats Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:81866800-81898600	Weak transcription	Right Atrium	heart
2	chr16:81868200-81886000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr16:81871200-81897200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr16:81876200-81918200	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr16:81876400-81889400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr16:81877000-81889200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr16:81877800-81890400	Genic enhancers	Primary B cells from peripheral blood	blood
8	chr16:81879400-81888000	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr16:81879800-81888000	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr16:81880000-81887600	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr16:81880000-81889000	Weak transcription	Primary hematopoietic stem cells	blood
12	chr16:81880000-81889200	Weak transcription	Lung	lung
13	chr16:81880000-81911200	Weak transcription	Pancreas	Pancrea
14	chr16:81880200-81885200	Weak transcription	Spleen	Spleen
15	chr16:81880200-81885800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
16	chr16:81880400-81888200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr16:81880400-81908200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr16:81881800-81885600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
19	chr16:81882800-81897200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr16:81883200-81885000	Weak transcription	Duodenum Mucosa	Duodenum
21	chr16:81883400-81884400	Enhancers	Primary B cells from cord blood	blood
22	chr16:81883600-81884000	Weak transcription	GM12878-XiMat	blood
23	chr16:81883600-81884200	Enhancers	A549	lung
24	chr16:81883600-81884200	Enhancers	Hela-S3	cervix

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