Variant report

Variant	rs72847468
Chromosome Location	chr11:8023965-8023966
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:8007800..8010303-chr11:8022829..8024867,3	MCF-7	breast:
2	chr11:8015926..8019399-chr11:8021894..8024855,4	K562	blood:
3	chr11:8017899..8020620-chr11:8022528..8024447,3	K562	blood:

Variant related genes	Relation type
ENSG00000175390	Chromatin interaction

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1043738	1.00[EUR][1000 genomes]
rs56295342	0.97[EUR][1000 genomes]
rs72847445	1.00[AMR][1000 genomes]
rs72847449	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72847456	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72847469	1.00[EUR][1000 genomes]
rs72847472	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7929026	0.97[EUR][1000 genomes]
rs7939213	0.97[EUR][1000 genomes]
rs7947944	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052808	chr11:8011647-8129191	Bivalent Enhancer Strong transcription Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:73 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8010800-8033400	Weak transcription	Right Atrium	heart
2	chr11:8016600-8025600	Weak transcription	Fetal Heart	heart
3	chr11:8017800-8024800	Weak transcription	Esophagus	oesophagus
4	chr11:8018000-8031800	Weak transcription	Aorta	Aorta
5	chr11:8018400-8032000	Weak transcription	Right Ventricle	heart
6	chr11:8019400-8024600	Weak transcription	Fetal Brain Male	brain
7	chr11:8020000-8024200	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr11:8020000-8024400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr11:8020000-8024800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
10	chr11:8020000-8028200	Weak transcription	Colon Smooth Muscle	Colon
11	chr11:8020000-8033000	Weak transcription	NHDF-Ad	bronchial
12	chr11:8020200-8024200	Weak transcription	NHEK	skin
13	chr11:8020200-8024600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr11:8020200-8025400	Weak transcription	Primary hematopoietic stem cells	blood
15	chr11:8020200-8025400	Weak transcription	Brain Germinal Matrix	brain
16	chr11:8020200-8026600	Weak transcription	Brain Cingulate Gyrus	brain
17	chr11:8020600-8025200	Weak transcription	HSMMtube	muscle
18	chr11:8020800-8024400	Weak transcription	Fetal Intestine Large	intestine
19	chr11:8020800-8024800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr11:8020800-8026400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr11:8021400-8024000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr11:8021400-8024600	Weak transcription	Primary T cells fromperipheralblood	blood
23	chr11:8021400-8024800	Weak transcription	HUES64 Cell Line	embryonic stem cell
24	chr11:8021800-8024000	Weak transcription	Fetal Muscle Trunk	muscle
25	chr11:8021800-8024400	Weak transcription	Fetal Brain Female	brain
26	chr11:8021800-8024400	Weak transcription	Fetal Thymus	thymus
27	chr11:8021800-8024600	Weak transcription	Fetal Stomach	stomach
28	chr11:8021800-8024800	Weak transcription	Fetal Intestine Small	intestine
29	chr11:8022000-8024000	Weak transcription	HUES6 Cell Line	embryonic stem cell
30	chr11:8022000-8024000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr11:8022000-8024000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr11:8022000-8024000	Weak transcription	Duodenum Mucosa	Duodenum
33	chr11:8022000-8024000	Weak transcription	Spleen	Spleen
34	chr11:8022000-8024200	Weak transcription	Sigmoid Colon	Sigmoid Colon
35	chr11:8022000-8024200	Weak transcription	Thymus	Thymus
36	chr11:8022000-8024400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr11:8022000-8024600	Weak transcription	Primary B cells from peripheral blood	blood
38	chr11:8022000-8024800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr11:8022000-8024800	Weak transcription	Adipose Nuclei	Adipose
40	chr11:8022000-8025000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr11:8022000-8025000	Weak transcription	Stomach Smooth Muscle	stomach
42	chr11:8022000-8025200	Weak transcription	Primary T helper cells fromperipheralblood	blood
43	chr11:8022000-8025200	Weak transcription	Brain Anterior Caudate	brain
44	chr11:8022000-8025400	Weak transcription	Muscle Satellite Cultured Cells	--
45	chr11:8022000-8025400	Weak transcription	Osteobl	bone
46	chr11:8022000-8026000	Weak transcription	Left Ventricle	heart
47	chr11:8022000-8026200	Weak transcription	Primary T cells from cord blood	blood
48	chr11:8022000-8027000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr11:8022000-8027400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr11:8022000-8028200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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