The 2.0 version of rSNPBase

Variant report

Variant rs72858978
Chromosome Location chr2:30806122-30806123
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30749000-30812600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:30757800-30809000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr2:30758600-30853800 Weak transcription Thymus Thymus
4 chr2:30758800-30809600 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr2:30766800-30810200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:30774800-30812000 Weak transcription Fetal Lung lung
7 chr2:30777000-30815800 Weak transcription Fetal Intestine Small intestine
8 chr2:30783400-30819800 Weak transcription Stomach Smooth Muscle stomach
9 chr2:30783800-30811000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr2:30784000-30812200 Weak transcription NH-A brain
11 chr2:30785200-30806800 Weak transcription Lung lung
12 chr2:30785200-30826600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr2:30785400-30818800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr2:30786200-30806400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr2:30786600-30808200 Weak transcription Left Ventricle heart
16 chr2:30786600-30818200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr2:30786600-30822400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr2:30786800-30806400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr2:30786800-30807200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr2:30786800-30818200 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr2:30789000-30816600 Weak transcription Esophagus oesophagus
22 chr2:30789200-30810800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr2:30789200-30818800 Weak transcription Fetal Intestine Large intestine
24 chr2:30790400-30811600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr2:30790800-30812200 Weak transcription Right Ventricle heart
26 chr2:30792400-30810200 Weak transcription NHEK skin
27 chr2:30792600-30863000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr2:30792800-30818400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr2:30792800-30818800 Weak transcription Fetal Kidney kidney
30 chr2:30792800-30851400 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr2:30793000-30811800 Weak transcription NHDF-Ad bronchial
32 chr2:30796600-30827000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr2:30797600-30806800 Weak transcription Aorta Aorta
34 chr2:30798000-30807800 Weak transcription Duodenum Mucosa Duodenum
35 chr2:30798000-30808200 Weak transcription Primary T cells fromperipheralblood blood
36 chr2:30798000-30808200 Weak transcription Pancreas Pancrea
37 chr2:30798000-30814200 Weak transcription Fetal Thymus thymus
38 chr2:30798000-30827600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:30798400-30806800 Weak transcription Primary hematopoietic stem cells blood
40 chr2:30798400-30839600 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr2:30799400-30812400 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr2:30802400-30809000 Enhancers Primary B cells from peripheral blood blood
43 chr2:30803400-30806200 Weak transcription HSMMtube muscle
44 chr2:30804000-30811400 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr2:30804200-30808600 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr2:30804200-30811000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr2:30804600-30806600 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr2:30805200-30806200 Weak transcription Primary B cells from cord blood blood
49 chr2:30805200-30806400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr2:30805400-30806800 Enhancers Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015