The 2.0 version of rSNPBase

Variant report

Variant rs72856689
Chromosome Location chr2:30743467-30743468
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30729000-30764600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr2:30733000-30756000 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr2:30734800-30764000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:30736800-30752400 Weak transcription Psoas Muscle Psoas
5 chr2:30738000-30750400 Weak transcription Liver Liver
6 chr2:30738000-30757000 Weak transcription Ovary ovary
7 chr2:30738200-30744000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr2:30738200-30750000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr2:30738200-30750800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr2:30738200-30750800 Weak transcription Stomach Smooth Muscle stomach
11 chr2:30738200-30751000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr2:30738200-30752400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr2:30738200-30758200 Weak transcription Right Ventricle heart
14 chr2:30738400-30748600 Weak transcription Fetal Kidney kidney
15 chr2:30738400-30756200 Weak transcription Hela-S3 cervix
16 chr2:30741000-30745200 Weak transcription Fetal Heart heart
17 chr2:30741400-30743600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr2:30741400-30744200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:30741600-30743600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
20 chr2:30741600-30744000 ZNF genes & repeats Thymus Thymus
21 chr2:30741800-30743600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
22 chr2:30741800-30744000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
23 chr2:30742000-30748400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr2:30742400-30743600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
25 chr2:30742400-30744000 ZNF genes & repeats Primary hematopoietic stem cells blood
26 chr2:30742600-30743600 ZNF genes & repeats K562 blood
27 chr2:30742800-30743600 Strong transcription A549 lung
28 chr2:30742800-30744000 Strong transcription Primary T killer naive cells fromperipheralblood blood
29 chr2:30742800-30745400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr2:30742800-30748400 Weak transcription Primary B cells from cord blood blood
31 chr2:30743000-30744000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:30743000-30744000 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr2:30743000-30745200 Weak transcription H1 Cell Line embryonic stem cell
34 chr2:30743000-30748400 Weak transcription Brain Cingulate Gyrus brain
35 chr2:30743000-30748600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr2:30743000-30748600 Weak transcription Primary T cells fromperipheralblood blood
37 chr2:30743000-30748600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr2:30743000-30750200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr2:30743000-30750400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr2:30743000-30750400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr2:30743000-30750400 Weak transcription NHLF lung
42 chr2:30743000-30752200 Weak transcription HSMMtube muscle
43 chr2:30743000-30754800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr2:30743000-30756000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr2:30743000-30756000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr2:30743000-30756000 Weak transcription HepG2 liver
47 chr2:30743000-30757000 Weak transcription Left Ventricle heart
48 chr2:30743000-30758200 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr2:30743000-30758200 Weak transcription Pancreas Pancrea
50 chr2:30743000-30758400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015