The 2.0 version of rSNPBase

Variant report

Variant rs72853183
Chromosome Location chr2:30696982-30696983
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30671600-30703400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr2:30671600-30704200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:30678400-30704200 Weak transcription Fetal Stomach stomach
4 chr2:30678600-30703800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr2:30678600-30710600 Weak transcription NHLF lung
6 chr2:30682400-30704400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr2:30688200-30697600 Weak transcription Thymus Thymus
8 chr2:30688200-30703400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr2:30688400-30697200 Weak transcription Right Ventricle heart
10 chr2:30688400-30703400 Weak transcription K562 blood
11 chr2:30688400-30703800 Weak transcription Left Ventricle heart
12 chr2:30688400-30704200 Weak transcription Aorta Aorta
13 chr2:30688400-30704600 Weak transcription Rectal Smooth Muscle rectum
14 chr2:30688600-30710000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr2:30693000-30697400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:30693200-30697800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:30693200-30702000 Weak transcription Fetal Intestine Small intestine
18 chr2:30693200-30702200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr2:30693600-30704000 Weak transcription A549 lung
20 chr2:30693600-30704000 Weak transcription HepG2 liver
21 chr2:30695000-30699000 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr2:30695200-30698000 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr2:30695200-30707000 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:30695400-30704400 Weak transcription Stomach Smooth Muscle stomach
25 chr2:30695600-30703600 Weak transcription GM12878-XiMat blood
26 chr2:30695600-30704200 Weak transcription Fetal Lung lung
27 chr2:30695600-30705400 Weak transcription Primary hematopoietic stem cells blood
28 chr2:30695800-30697000 Weak transcription Primary B cells from peripheral blood blood
29 chr2:30695800-30697800 Weak transcription Primary B cells from cord blood blood
30 chr2:30695800-30698000 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr2:30695800-30698600 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr2:30695800-30704000 Weak transcription NHDF-Ad bronchial
33 chr2:30695800-30704400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:30695800-30706600 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr2:30696000-30698000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr2:30696000-30701400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:30696000-30704200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr2:30696200-30710600 Weak transcription Ovary ovary
39 chr2:30696600-30697200 Enhancers Fetal Heart heart
40 chr2:30696600-30703400 Weak transcription Duodenum Mucosa Duodenum
41 chr2:30696800-30697200 Weak transcription Fetal Kidney kidney
42 chr2:30696800-30697800 Weak transcription Pancreas Pancrea
43 chr2:30696800-30698200 Weak transcription Primary T cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015