The 2.0 version of rSNPBase

Variant report

Variant rs60449073
Chromosome Location chr2:30741787-30741788
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30726200-30742600 Weak transcription Pancreas Pancrea
2 chr2:30729000-30764600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr2:30732800-30742000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr2:30733000-30756000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr2:30734800-30742200 Weak transcription Gastric stomach
6 chr2:30734800-30764000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr2:30735000-30741800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:30735000-30742600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:30735000-30742600 Weak transcription HSMMtube muscle
10 chr2:30735400-30741800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr2:30735400-30742200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:30735400-30742200 Weak transcription H9 Cell Line embryonic stem cell
13 chr2:30735400-30742600 Weak transcription Fetal Intestine Large intestine
14 chr2:30735600-30742800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr2:30736800-30752400 Weak transcription Psoas Muscle Psoas
16 chr2:30737000-30742400 Weak transcription Left Ventricle heart
17 chr2:30737600-30742000 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr2:30737800-30741800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr2:30737800-30742600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr2:30738000-30741800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr2:30738000-30741800 Weak transcription Fetal Muscle Trunk muscle
22 chr2:30738000-30742200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr2:30738000-30742600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:30738000-30742600 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr2:30738000-30742600 Weak transcription NHEK skin
26 chr2:30738000-30750400 Weak transcription Liver Liver
27 chr2:30738000-30757000 Weak transcription Ovary ovary
28 chr2:30738200-30741800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr2:30738200-30741800 Weak transcription Duodenum Mucosa Duodenum
30 chr2:30738200-30742600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:30738200-30742600 Weak transcription Rectal Smooth Muscle rectum
32 chr2:30738200-30742600 Weak transcription NHLF lung
33 chr2:30738200-30742800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr2:30738200-30744000 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr2:30738200-30750000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr2:30738200-30750800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:30738200-30750800 Weak transcription Stomach Smooth Muscle stomach
38 chr2:30738200-30751000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:30738200-30752400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr2:30738200-30758200 Weak transcription Right Ventricle heart
41 chr2:30738400-30742000 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr2:30738400-30742200 Weak transcription Fetal Stomach stomach
43 chr2:30738400-30748600 Weak transcription Fetal Kidney kidney
44 chr2:30738400-30756200 Weak transcription Hela-S3 cervix
45 chr2:30738600-30741800 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr2:30739000-30742200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
47 chr2:30739000-30742400 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr2:30739400-30741800 Weak transcription Lung lung
49 chr2:30739400-30742000 Weak transcription Fetal Lung lung
50 chr2:30739400-30742200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015