The 2.0 version of rSNPBase

Variant report

Variant rs72856612
Chromosome Location chr2:30707493-30707494
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30678600-30710600 Weak transcription NHLF lung
2 chr2:30688600-30710000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr2:30696200-30710600 Weak transcription Ovary ovary
4 chr2:30697400-30710400 Weak transcription Fetal Kidney kidney
5 chr2:30697800-30720800 Weak transcription Thymus Thymus
6 chr2:30698000-30708000 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr2:30698000-30709400 Weak transcription Pancreas Pancrea
8 chr2:30698200-30710600 Weak transcription Primary T cells fromperipheralblood blood
9 chr2:30699000-30709600 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr2:30699000-30711800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr2:30699600-30709400 Weak transcription Right Ventricle heart
12 chr2:30701200-30714400 Weak transcription HSMM muscle
13 chr2:30702800-30710400 Weak transcription Primary T cells from cord blood blood
14 chr2:30704600-30709400 Weak transcription Left Ventricle heart
15 chr2:30704600-30710600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:30704600-30710600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:30704600-30715800 Weak transcription Psoas Muscle Psoas
18 chr2:30704600-30719600 Weak transcription Right Atrium heart
19 chr2:30704600-30719800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr2:30704600-30720600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:30704800-30708600 Weak transcription K562 blood
22 chr2:30704800-30710400 Weak transcription Colon Smooth Muscle Colon
23 chr2:30704800-30710800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr2:30704800-30714200 Weak transcription HSMMtube muscle
25 chr2:30704800-30714400 Weak transcription A549 lung
26 chr2:30705000-30709400 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr2:30705200-30710400 Weak transcription Duodenum Mucosa Duodenum
28 chr2:30705400-30710400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:30705600-30708000 Weak transcription Fetal Stomach stomach
30 chr2:30705600-30710200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr2:30705600-30710600 Weak transcription Fetal Lung lung
32 chr2:30705600-30711000 Weak transcription Fetal Intestine Large intestine
33 chr2:30705600-30711400 Weak transcription Stomach Smooth Muscle stomach
34 chr2:30705800-30709400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr2:30706000-30711000 Weak transcription Small Intestine intestine
36 chr2:30706200-30709200 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr2:30706400-30712200 Enhancers Fetal Heart heart
38 chr2:30706600-30707600 Enhancers Primary T helper cells fromperipheralblood blood
39 chr2:30706600-30708200 Enhancers GM12878-XiMat blood
40 chr2:30707000-30707800 Enhancers Primary T helper naive cells from peripheral blood blood
41 chr2:30707000-30707800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:30707000-30707800 Enhancers Pancreatic Islets Pancreatic Islet
43 chr2:30707000-30708000 Enhancers Primary B cells from cord blood blood
44 chr2:30707000-30708400 Enhancers Primary T helper cells PMA-I stimulated --
45 chr2:30707400-30708000 Weak transcription Primary B cells from peripheral blood blood
46 chr2:30707400-30708600 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015