Variant report

Variant	rs72859204
Chromosome Location	chr3:34734323-34734324
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11708818	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11714434	0.88[EUR][1000 genomes]
rs11716329	1.00[EUR][1000 genomes]
rs13433999	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1520635	0.96[EUR][1000 genomes]
rs17032086	0.88[EUR][1000 genomes]
rs28620172	0.91[EUR][1000 genomes]
rs2884477	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7639968	0.88[EUR][1000 genomes]
rs9311061	0.92[EUR][1000 genomes]
rs9311063	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9841899	0.88[EUR][1000 genomes]
rs9844596	1.00[EUR][1000 genomes]
rs9844622	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9853177	1.00[EUR][1000 genomes]
rs9864939	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9868482	1.00[EUR][1000 genomes]
rs9881526	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1816528	chr3:34683998-34757534	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv997333	chr3:34734012-34795588	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1014239	chr3:34734012-34806671	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34722200-34734400	Weak transcription	Thymus	Thymus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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