Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10501027	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs12803523	0.80[EUR][1000 genomes]
rs16914910	0.80[EUR][1000 genomes]
rs17308621	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17308649	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1901416	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs67333685	0.94[EUR][1000 genomes]
rs7106427	0.87[EUR][1000 genomes]
rs7113777	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7127437	0.89[EUR][1000 genomes]
rs72875022	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs72875027	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs72875031	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs72875080	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72875094	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72876806	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72876833	0.97[EUR][1000 genomes]
rs72876856	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72876864	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72876871	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7932544	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7936563	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760599	chr11:25186984-26159450	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1046507	chr11:25469712-26111707	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv469948	chr11:25859783-26026233	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1041778	chr11:25898574-26098141	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26010000-26013400	Weak transcription	Fetal Brain Male	brain
2	chr11:26010200-26014000	Weak transcription	Adipose Nuclei	Adipose
3	chr11:26011600-26013200	Enhancers	Hela-S3	cervix
4	chr11:26011600-26014000	Enhancers	Fetal Lung	lung
5	chr11:26012400-26013800	Weak transcription	Fetal Brain Female	brain

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