Variant report

Variant	rs72904176
Chromosome Location	chr11:19222993-19222994
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12290229	0.82[EUR][1000 genomes]
rs56090946	0.82[EUR][1000 genomes]
rs7102081	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040805	chr11:19037871-19892803	Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
2	nsv540957	chr11:19037871-19892803	Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:19219200-19223600	Active TSS	Right Atrium	heart
2	chr11:19219800-19223600	Active TSS	Left Ventricle	heart
3	chr11:19219800-19223600	Active TSS	Right Ventricle	heart
4	chr11:19219800-19224200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr11:19220800-19223000	Enhancers	Primary hematopoietic stem cells	blood
6	chr11:19220800-19226000	Weak transcription	Small Intestine	intestine
7	chr11:19221200-19223200	Enhancers	HSMMtube	muscle
8	chr11:19221400-19223800	Active TSS	Skeletal Muscle Male	skeletal muscle
9	chr11:19221400-19224000	Enhancers	NH-A	brain
10	chr11:19221800-19224000	Enhancers	Hela-S3	cervix
11	chr11:19222000-19223000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr11:19222000-19224000	Enhancers	NHDF-Ad	bronchial
13	chr11:19222200-19223600	ZNF genes & repeats	Fetal Heart	heart
14	chr11:19222400-19223600	Active TSS	Fetal Muscle Trunk	muscle
15	chr11:19222400-19224200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr11:19222600-19223400	Active TSS	Fetal Muscle Leg	muscle
17	chr11:19222600-19223400	Bivalent Enhancer	Osteobl	bone
18	chr11:19222600-19223600	Weak transcription	Fetal Lung	lung
19	chr11:19222600-19223800	Active TSS	Skeletal Muscle Female	skeletal muscle
20	chr11:19222600-19224000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr11:19222600-19224200	Enhancers	HSMM	muscle
22	chr11:19222600-19224600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr11:19222600-19231000	Weak transcription	Gastric	stomach
24	chr11:19222800-19223200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr11:19222800-19223400	Active TSS	Psoas Muscle	Psoas

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