Variant report

Variant	rs72907585
Chromosome Location	chr11:32402591-32402592
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs5030267	0.81[AMR][1000 genomes]
rs5030276	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs5030308	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs5030309	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs5030322	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs5030331	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72907570	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72907573	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72907575	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72907578	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72907581	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72907582	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72907590	1.00[EUR][1000 genomes]
rs72907594	1.00[EUR][1000 genomes]
rs72907595	1.00[EUR][1000 genomes]
rs72907600	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72907602	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32396400-32407800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:32401200-32404200	Enhancers	Fetal Heart	heart
3	chr11:32401800-32403000	Weak transcription	Ovary	ovary
4	chr11:32401800-32404200	Weak transcription	K562	blood
5	chr11:32402200-32402600	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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