Variant report

Variant	rs72909624
Chromosome Location	chr1:59227462-59227463
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:59217240..59220622-chr1:59226403..59228329,3	K562	blood:

rs_ID	r²[population]
rs12057137	1.00[EUR][1000 genomes]
rs12076312	1.00[EUR][1000 genomes]
rs55648009	1.00[EUR][1000 genomes]
rs57497727	1.00[EUR][1000 genomes]
rs57967967	1.00[EUR][1000 genomes]
rs58742108	1.00[EUR][1000 genomes]
rs58904200	1.00[EUR][1000 genomes]
rs60809319	1.00[EUR][1000 genomes]
rs72922103	1.00[EUR][1000 genomes]

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:59221200-59228800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:59222200-59227600	Weak transcription	NH-A	brain
3	chr1:59222200-59228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:59222200-59230400	Weak transcription	Lung	lung
5	chr1:59222400-59227600	Weak transcription	Hela-S3	cervix
6	chr1:59222400-59227800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr1:59222600-59227800	Weak transcription	HSMM	muscle
8	chr1:59222600-59228600	Weak transcription	Rectal Smooth Muscle	rectum
9	chr1:59222800-59227600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr1:59222800-59227800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr1:59222800-59227800	Weak transcription	NHEK	skin
12	chr1:59222800-59227800	Weak transcription	Osteobl	bone
13	chr1:59222800-59229000	Weak transcription	Right Atrium	heart
14	chr1:59223000-59227600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr1:59223000-59230200	Weak transcription	Aorta	Aorta
16	chr1:59223200-59227800	Weak transcription	Small Intestine	intestine
17	chr1:59223200-59228600	Weak transcription	Duodenum Mucosa	Duodenum
18	chr1:59223200-59229600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr1:59226600-59239000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr1:59227000-59228400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr1:59227000-59228800	Enhancers	HepG2	liver
22	chr1:59227000-59228800	Enhancers	NHDF-Ad	bronchial
23	chr1:59227000-59231400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr1:59227000-59231400	Enhancers	HMEC	breast
25	chr1:59227200-59228600	Enhancers	HUVEC	blood vessel
26	chr1:59227400-59228000	Enhancers	Muscle Satellite Cultured Cells	--
27	chr1:59227400-59228600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr1:59227400-59231400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr1:59227400-59231400	Enhancers	NHLF	lung

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