Variant report

Variant	rs72910303
Chromosome Location	chr1:56526004-56526005
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs17113266	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17113293	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17113390	1.00[AMR][1000 genomes]
rs17113395	1.00[AMR][1000 genomes]
rs2896880	1.00[AMR][1000 genomes]
rs58563317	1.00[AMR][1000 genomes]
rs60333097	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61628408	1.00[AMR][1000 genomes]
rs72908400	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72910322	1.00[AMR][1000 genomes]
rs72912224	1.00[AMR][1000 genomes]
rs7547444	1.00[AMR][1000 genomes]

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56518200-56540000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:56521400-56534600	Weak transcription	Psoas Muscle	Psoas
3	chr1:56522800-56526400	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr1:56522800-56526400	Weak transcription	NHLF	lung
5	chr1:56522800-56529200	Weak transcription	HSMMtube	muscle
6	chr1:56522800-56529400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr1:56522800-56529800	Weak transcription	Osteobl	bone
8	chr1:56523000-56526400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr1:56523000-56529200	Weak transcription	HSMM	muscle
10	chr1:56523800-56526400	Weak transcription	Fetal Brain Male	brain
11	chr1:56524000-56526400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr1:56524000-56526400	Weak transcription	NHDF-Ad	bronchial
13	chr1:56524200-56528200	Weak transcription	Adipose Nuclei	Adipose
14	chr1:56524400-56526200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr1:56524400-56526400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr1:56524400-56526400	Weak transcription	Lung	lung
17	chr1:56524400-56527400	Weak transcription	Fetal Stomach	stomach
18	chr1:56524400-56528200	Weak transcription	Right Atrium	heart
19	chr1:56525600-56526200	Enhancers	H9 Cell Line	embryonic stem cell
20	chr1:56525600-56526800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr1:56525600-56526800	Enhancers	Stomach Smooth Muscle	stomach
22	chr1:56525600-56527800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr1:56525600-56530400	Enhancers	Placenta	Placenta
24	chr1:56525800-56526800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr1:56525800-56526800	Enhancers	Fetal Muscle Leg	muscle
26	chr1:56525800-56527200	Enhancers	Fetal Lung	lung
27	chr1:56526000-56526600	Enhancers	Esophagus	oesophagus
28	chr1:56526000-56526600	Enhancers	Placenta Amnion	Placenta Amnion
29	chr1:56526000-56531200	Weak transcription	Ovary	ovary

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links