Variant report

Variant	rs72922098
Chromosome Location	chr3:97827662-97827663
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs57254506	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs58748505	1.00[EUR][1000 genomes]
rs59543641	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60261489	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60519591	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60778947	1.00[EUR][1000 genomes]
rs61219243	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6786885	1.00[EUR][1000 genomes]
rs72922826	1.00[EUR][1000 genomes]
rs72924114	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72926086	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72926102	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927909	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927911	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927919	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927921	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927923	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927924	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927927	0.97[AFR][1000 genomes]
rs72927955	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927958	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927968	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927973	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927975	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72927982	1.00[EUR][1000 genomes]
rs72929909	1.00[EUR][1000 genomes]
rs72929910	1.00[EUR][1000 genomes]
rs72929912	1.00[EUR][1000 genomes]
rs72933943	1.00[EUR][1000 genomes]
rs72933953	1.00[EUR][1000 genomes]
rs72933955	1.00[EUR][1000 genomes]
rs72933957	1.00[EUR][1000 genomes]
rs72933960	1.00[EUR][1000 genomes]
rs72933962	1.00[EUR][1000 genomes]
rs72933966	1.00[EUR][1000 genomes]
rs72933968	1.00[EUR][1000 genomes]
rs72933969	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877207	chr3:97708955-97899294	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv869347	chr3:97742604-98051633	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv877209	chr3:97806616-98049409	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv963576	chr3:97825434-98041343	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:97823800-97828200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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