The 2.0 version of rSNPBase

Variant report

Variant rs72930646
Chromosome Location chr3:100483206-100483207
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100450000-100501000 Weak transcription Esophagus oesophagus
2 chr3:100467400-100497600 Weak transcription Fetal Intestine Small intestine
3 chr3:100468200-100488600 Weak transcription Colon Smooth Muscle Colon
4 chr3:100469800-100498200 Weak transcription Brain Cingulate Gyrus brain
5 chr3:100469800-100501400 Weak transcription Rectal Smooth Muscle rectum
6 chr3:100470200-100498400 Weak transcription Right Ventricle heart
7 chr3:100471000-100495800 Weak transcription Placenta Amnion Placenta Amnion
8 chr3:100471600-100500400 Weak transcription Lung lung
9 chr3:100471800-100486200 Weak transcription Brain Substantia Nigra brain
10 chr3:100471800-100494600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:100471800-100502000 Weak transcription Brain Anterior Caudate brain
12 chr3:100472600-100484600 Weak transcription NHEK skin
13 chr3:100472800-100494400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr3:100473400-100488400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr3:100473600-100488600 Weak transcription Fetal Muscle Trunk muscle
16 chr3:100473600-100488800 Weak transcription Muscle Satellite Cultured Cells --
17 chr3:100473600-100489200 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr3:100473800-100484600 Weak transcription HMEC breast
19 chr3:100473800-100496400 Weak transcription Fetal Intestine Large intestine
20 chr3:100474000-100488800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr3:100474400-100484800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr3:100474400-100494200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr3:100474400-100500200 Weak transcription HSMM muscle
24 chr3:100474400-100501200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr3:100475000-100488000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr3:100475000-100499000 Weak transcription Placenta Placenta
27 chr3:100475600-100485600 Weak transcription Left Ventricle heart
28 chr3:100475600-100487600 Weak transcription NHDF-Ad bronchial
29 chr3:100475600-100520000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr3:100477200-100484800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:100478400-100496600 Weak transcription Aorta Aorta
32 chr3:100478800-100502000 Weak transcription Psoas Muscle Psoas
33 chr3:100479000-100488600 Weak transcription Fetal Stomach stomach
34 chr3:100479400-100488000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr3:100479400-100493000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr3:100479800-100488600 Weak transcription Fetal Lung lung
37 chr3:100480200-100493800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr3:100480400-100488400 Weak transcription Fetal Muscle Leg muscle
39 chr3:100480400-100488600 Weak transcription Ovary ovary
40 chr3:100482400-100483400 Strong transcription Stomach Smooth Muscle stomach
41 chr3:100482800-100483400 Strong transcription Osteobl bone
42 chr3:100482800-100484000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr3:100482800-100485000 Strong transcription HSMMtube muscle
44 chr3:100483000-100483400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:100483000-100484000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015