Variant report

Variant	rs72930687
Chromosome Location	chr3:100506672-100506673
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:100480324..100483871-chr3:100505930..100509875,3	MCF-7	breast:

rs_ID	r²[population]
rs57808154	1.00[AFR][1000 genomes]
rs57880779	1.00[AFR][1000 genomes]
rs58073790	1.00[AFR][1000 genomes]
rs58285457	0.88[AFR][1000 genomes]
rs59374249	1.00[AFR][1000 genomes]
rs60130421	1.00[AFR][1000 genomes]
rs60359060	1.00[AFR][1000 genomes]
rs72915270	0.88[AFR][1000 genomes]
rs72915287	0.88[AFR][1000 genomes]
rs72915299	0.88[AFR][1000 genomes]
rs72917322	0.88[AFR][1000 genomes]
rs72919404	1.00[AFR][1000 genomes]
rs72919406	1.00[AFR][1000 genomes]
rs72919437	1.00[AFR][1000 genomes]
rs72928653	1.00[AFR][1000 genomes]
rs72928666	1.00[AFR][1000 genomes]
rs72928670	1.00[AFR][1000 genomes]
rs72928695	1.00[AFR][1000 genomes]
rs72928994	1.00[AFR][1000 genomes]
rs72930632	1.00[AFR][1000 genomes]
rs72930643	0.94[AFR][1000 genomes]
rs72930646	0.94[AFR][1000 genomes]
rs72930656	1.00[AFR][1000 genomes]
rs72930658	1.00[AFR][1000 genomes]
rs72930661	1.00[AFR][1000 genomes]
rs72930666	1.00[AFR][1000 genomes]
rs72930674	0.89[AFR][1000 genomes]
rs72930685	1.00[AFR][1000 genomes]
rs72930686	1.00[AFR][1000 genomes]
rs72930720	1.00[AFR][1000 genomes]

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100475600-100520000	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr3:100494800-100523400	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr3:100496800-100511200	Weak transcription	Aorta	Aorta
4	chr3:100501200-100516600	Weak transcription	HSMM	muscle
5	chr3:100502200-100518600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr3:100502400-100530400	Weak transcription	Colon Smooth Muscle	Colon
7	chr3:100502600-100516800	Weak transcription	Rectal Smooth Muscle	rectum
8	chr3:100505000-100506800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr3:100505000-100510400	Weak transcription	Psoas Muscle	Psoas
10	chr3:100505000-100515400	Weak transcription	Adipose Nuclei	Adipose
11	chr3:100505000-100515400	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr3:100505000-100516600	Weak transcription	Left Ventricle	heart
13	chr3:100505200-100507000	Weak transcription	Fetal Muscle Leg	muscle
14	chr3:100505200-100508000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr3:100505200-100508000	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr3:100505200-100510800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr3:100505200-100512800	Weak transcription	HSMMtube	muscle
18	chr3:100505200-100515200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr3:100505200-100515200	Weak transcription	Fetal Stomach	stomach
20	chr3:100505200-100515400	Weak transcription	Muscle Satellite Cultured Cells	--
21	chr3:100505200-100515400	Weak transcription	HUVEC	blood vessel
22	chr3:100505200-100558200	Weak transcription	Ovary	ovary
23	chr3:100505200-100582800	Weak transcription	Fetal Muscle Trunk	muscle
24	chr3:100505600-100514400	Strong transcription	Osteobl	bone
25	chr3:100505800-100515400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr3:100505800-100515400	Weak transcription	Fetal Lung	lung
27	chr3:100506000-100548400	Weak transcription	Stomach Smooth Muscle	stomach
28	chr3:100506400-100507200	Strong transcription	NHDF-Ad	bronchial

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