Variant report

Variant	rs72930674
Chromosome Location	chr3:100498519-100498520
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1027703	0.91[EUR][1000 genomes]
rs1319005	0.91[EUR][1000 genomes]
rs13315123	0.91[EUR][1000 genomes]
rs13316513	0.91[EUR][1000 genomes]
rs13317522	0.91[EUR][1000 genomes]
rs13317752	0.91[EUR][1000 genomes]
rs13318793	0.91[EUR][1000 genomes]
rs13319530	0.91[EUR][1000 genomes]
rs13325014	0.91[EUR][1000 genomes]
rs13326828	0.91[EUR][1000 genomes]
rs13327329	0.91[EUR][1000 genomes]
rs13433681	0.91[EUR][1000 genomes]
rs13433684	0.91[EUR][1000 genomes]
rs13434023	0.91[EUR][1000 genomes]
rs16842455	1.00[EUR][1000 genomes]
rs16842458	1.00[EUR][1000 genomes]
rs16842471	1.00[EUR][1000 genomes]
rs16842472	1.00[EUR][1000 genomes]
rs16842478	1.00[EUR][1000 genomes]
rs16842679	0.91[EUR][1000 genomes]
rs16842705	0.91[EUR][1000 genomes]
rs16847405	0.91[EUR][1000 genomes]
rs2128225	0.91[EUR][1000 genomes]
rs2128226	0.91[EUR][1000 genomes]
rs28380383	0.91[EUR][1000 genomes]
rs28469597	0.91[EUR][1000 genomes]
rs28523825	0.91[EUR][1000 genomes]
rs28530760	0.91[EUR][1000 genomes]
rs35606932	1.00[EUR][1000 genomes]
rs35648279	0.91[EUR][1000 genomes]
rs41272969	1.00[EUR][1000 genomes]
rs41272973	1.00[EUR][1000 genomes]
rs41272977	1.00[EUR][1000 genomes]
rs41272979	0.91[EUR][1000 genomes]
rs41272989	1.00[EUR][1000 genomes]
rs41273547	1.00[EUR][1000 genomes]
rs4317136	0.91[EUR][1000 genomes]
rs55865709	1.00[EUR][1000 genomes]
rs56254963	1.00[EUR][1000 genomes]
rs56384617	1.00[EUR][1000 genomes]
rs57687306	0.91[EUR][1000 genomes]
rs57808154	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57880779	0.89[AFR][1000 genomes]
rs58073790	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs58121738	0.91[EUR][1000 genomes]
rs59374249	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60130421	0.89[AFR][1000 genomes]
rs60359060	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72914677	0.81[EUR][1000 genomes]
rs72919404	0.89[AFR][1000 genomes]
rs72919406	0.89[AFR][1000 genomes]
rs72919417	1.00[EUR][1000 genomes]
rs72919423	0.91[EUR][1000 genomes]
rs72919426	0.91[EUR][1000 genomes]
rs72919433	0.91[EUR][1000 genomes]
rs72919437	0.89[AFR][1000 genomes]
rs72928626	0.91[EUR][1000 genomes]
rs72928632	0.91[EUR][1000 genomes]
rs72928634	0.91[EUR][1000 genomes]
rs72928653	0.89[AFR][1000 genomes]
rs72928662	0.91[EUR][1000 genomes]
rs72928666	0.89[AFR][1000 genomes]
rs72928670	0.89[AFR][1000 genomes]
rs72928677	0.91[EUR][1000 genomes]
rs72928680	0.91[EUR][1000 genomes]
rs72928695	0.89[AFR][1000 genomes]
rs72928697	0.91[EUR][1000 genomes]
rs72928698	0.91[EUR][1000 genomes]
rs72928994	0.89[AFR][1000 genomes]
rs72929000	0.91[EUR][1000 genomes]
rs72929300	0.81[EUR][1000 genomes]
rs72930614	0.91[EUR][1000 genomes]
rs72930617	0.91[EUR][1000 genomes]
rs72930632	0.89[AFR][1000 genomes]
rs72930643	0.83[AFR][1000 genomes]
rs72930646	0.83[AFR][1000 genomes]
rs72930656	0.89[AFR][1000 genomes]
rs72930658	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72930661	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72930666	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72930669	1.00[EUR][1000 genomes]
rs72930671	1.00[EUR][1000 genomes]
rs72930673	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72930677	0.90[AFR][1000 genomes]
rs72930679	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72930685	0.89[AFR][1000 genomes]
rs72930686	0.89[AFR][1000 genomes]
rs72930687	0.89[AFR][1000 genomes]
rs72930713	0.91[EUR][1000 genomes]
rs72930716	0.91[EUR][1000 genomes]
rs72930720	0.89[AFR][1000 genomes]
rs72930730	0.91[EUR][1000 genomes]
rs7628074	1.00[EUR][1000 genomes]
rs7628965	1.00[EUR][1000 genomes]
rs7637207	1.00[EUR][1000 genomes]
rs7647983	1.00[EUR][1000 genomes]
rs9290170	0.91[EUR][1000 genomes]
rs9290213	0.91[EUR][1000 genomes]
rs9631470	0.91[EUR][1000 genomes]
rs967308	0.91[EUR][1000 genomes]
rs967309	0.91[EUR][1000 genomes]
rs9811997	0.91[EUR][1000 genomes]
rs9813673	0.91[EUR][1000 genomes]
rs9813730	0.91[EUR][1000 genomes]
rs9817424	0.91[EUR][1000 genomes]
rs9818055	0.91[EUR][1000 genomes]
rs9818126	0.91[EUR][1000 genomes]
rs9823506	0.91[EUR][1000 genomes]
rs9824297	0.91[EUR][1000 genomes]
rs9825075	0.91[EUR][1000 genomes]
rs9826446	0.91[EUR][1000 genomes]
rs9832907	0.91[EUR][1000 genomes]
rs9833043	0.91[EUR][1000 genomes]
rs9833524	0.91[EUR][1000 genomes]
rs9834987	0.91[EUR][1000 genomes]
rs9839133	0.91[EUR][1000 genomes]
rs9840416	0.91[EUR][1000 genomes]
rs9842040	0.91[EUR][1000 genomes]
rs9851573	0.91[EUR][1000 genomes]
rs9853377	0.91[EUR][1000 genomes]
rs9853496	0.91[EUR][1000 genomes]
rs9853591	0.91[EUR][1000 genomes]
rs9853596	0.91[EUR][1000 genomes]
rs9856442	0.91[EUR][1000 genomes]
rs9856776	0.91[EUR][1000 genomes]
rs9859204	0.91[EUR][1000 genomes]
rs9859445	0.91[EUR][1000 genomes]
rs9859523	0.91[EUR][1000 genomes]
rs9859730	0.91[EUR][1000 genomes]
rs9861416	0.91[EUR][1000 genomes]
rs9864113	0.91[EUR][1000 genomes]
rs9866866	0.91[EUR][1000 genomes]
rs9870028	0.91[EUR][1000 genomes]
rs9871767	0.91[EUR][1000 genomes]
rs9873252	0.81[EUR][1000 genomes]
rs9876678	0.91[EUR][1000 genomes]
rs9877317	1.00[EUR][1000 genomes]
rs9877865	0.91[EUR][1000 genomes]
rs9878155	0.91[EUR][1000 genomes]
rs9879396	0.83[EUR][1000 genomes]
rs9881780	0.91[EUR][1000 genomes]
rs9881943	0.91[EUR][1000 genomes]
rs9882151	0.81[EUR][1000 genomes]
rs9883418	0.91[EUR][1000 genomes]

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100450000-100501000	Weak transcription	Esophagus	oesophagus
2	chr3:100469800-100501400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr3:100471600-100500400	Weak transcription	Lung	lung
4	chr3:100471800-100502000	Weak transcription	Brain Anterior Caudate	brain
5	chr3:100474400-100500200	Weak transcription	HSMM	muscle
6	chr3:100474400-100501200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr3:100475000-100499000	Weak transcription	Placenta	Placenta
8	chr3:100475600-100520000	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr3:100478800-100502000	Weak transcription	Psoas Muscle	Psoas
10	chr3:100488600-100504600	Weak transcription	Adipose Nuclei	Adipose
11	chr3:100489600-100500200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr3:100489800-100504800	Weak transcription	Left Ventricle	heart
13	chr3:100492400-100501000	Strong transcription	Stomach Smooth Muscle	stomach
14	chr3:100494800-100499200	Strong transcription	Fetal Stomach	stomach
15	chr3:100494800-100501600	Weak transcription	HMEC	breast
16	chr3:100494800-100523400	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr3:100495000-100499200	Strong transcription	HSMMtube	muscle
18	chr3:100495000-100501000	Weak transcription	Colon Smooth Muscle	Colon
19	chr3:100495600-100499000	Strong transcription	Ovary	ovary
20	chr3:100496200-100504200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr3:100496600-100500000	Weak transcription	NHEK	skin
22	chr3:100496600-100500400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr3:100496800-100498600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr3:100496800-100498800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr3:100496800-100498800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr3:100496800-100498800	Weak transcription	NH-A	brain
27	chr3:100496800-100500000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr3:100496800-100500400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr3:100496800-100500400	Weak transcription	NHLF	lung
30	chr3:100496800-100501200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr3:100496800-100511200	Weak transcription	Aorta	Aorta
32	chr3:100497200-100498600	Weak transcription	NHDF-Ad	bronchial
33	chr3:100497200-100500000	Strong transcription	Osteobl	bone
34	chr3:100497200-100500400	Weak transcription	Fetal Muscle Leg	muscle
35	chr3:100497200-100500600	Weak transcription	Fetal Lung	lung
36	chr3:100497200-100501000	Weak transcription	Fetal Muscle Trunk	muscle
37	chr3:100497200-100501400	Weak transcription	Fetal Intestine Large	intestine
38	chr3:100497200-100504400	Weak transcription	Duodenum Smooth Muscle	Duodenum
39	chr3:100498200-100501400	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr3:100498200-100502400	Enhancers	Muscle Satellite Cultured Cells	--
41	chr3:100498200-100502800	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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