Variant report

Variant rs28380383
Chromosome Location chr3:100448697-100448698
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100429600-100454400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:100429800-100454400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr3:100429800-100455200 Weak transcription Brain Substantia Nigra brain
4 chr3:100429800-100475000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr3:100430400-100473000 Strong transcription Fetal Thymus thymus
6 chr3:100431000-100454400 Weak transcription Rectal Smooth Muscle rectum
7 chr3:100431200-100473000 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr3:100431400-100452400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr3:100432400-100474400 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr3:100432800-100473600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr3:100433000-100472400 Strong transcription Primary monocytes fromperipheralblood blood
12 chr3:100433200-100451800 Strong transcription Primary T cells fromperipheralblood blood
13 chr3:100433800-100450400 Strong transcription Primary hematopoietic stem cells blood
14 chr3:100434400-100478200 Weak transcription Spleen Spleen
15 chr3:100435600-100455400 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr3:100436000-100474400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr3:100436600-100471600 Strong transcription Primary T regulatory cells fromperipheralblood blood
18 chr3:100436800-100473000 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr3:100437000-100449000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr3:100437000-100461600 Strong transcription Rectal Mucosa Donor 29 rectum
21 chr3:100437200-100453800 Weak transcription Small Intestine intestine
22 chr3:100437400-100472600 Strong transcription Dnd41 blood
23 chr3:100437600-100475000 Strong transcription Placenta Placenta
24 chr3:100437800-100474400 Strong transcription Duodenum Mucosa Duodenum
25 chr3:100438200-100449000 Strong transcription Osteobl bone
26 chr3:100438400-100449000 Strong transcription Primary neutrophils fromperipheralblood blood
27 chr3:100438800-100473800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:100439600-100449200 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr3:100439600-100449400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr3:100439800-100448800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr3:100440000-100449400 Weak transcription K562 blood
32 chr3:100440800-100449400 Weak transcription Ovary ovary
33 chr3:100441000-100449600 Weak transcription Esophagus oesophagus
34 chr3:100441000-100452800 Weak transcription Colonic Mucosa Colon
35 chr3:100441000-100452800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr3:100441000-100453000 Weak transcription Aorta Aorta
37 chr3:100441000-100456200 Weak transcription Gastric stomach
38 chr3:100441000-100458600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr3:100441000-100470800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr3:100441000-100473000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr3:100441000-100474400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:100441000-100479400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr3:100441400-100448800 Weak transcription Fetal Kidney kidney
44 chr3:100441400-100449000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr3:100441600-100449400 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr3:100443200-100462200 Strong transcription Adipose Nuclei Adipose
47 chr3:100443400-100449200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr3:100443400-100472200 Strong transcription Primary T helper cells PMA-I stimulated --
49 chr3:100443600-100466000 Strong transcription Fetal Intestine Large intestine
50 chr3:100444000-100448800 Strong transcription GM12878-XiMat blood

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