The 2.0 version of rSNPBase

Variant report

Variant rs72930671
Chromosome Location chr3:100496745-100496746
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100450000-100501000 Weak transcription Esophagus oesophagus
2 chr3:100467400-100497600 Weak transcription Fetal Intestine Small intestine
3 chr3:100469800-100498200 Weak transcription Brain Cingulate Gyrus brain
4 chr3:100469800-100501400 Weak transcription Rectal Smooth Muscle rectum
5 chr3:100470200-100498400 Weak transcription Right Ventricle heart
6 chr3:100471600-100500400 Weak transcription Lung lung
7 chr3:100471800-100502000 Weak transcription Brain Anterior Caudate brain
8 chr3:100474400-100500200 Weak transcription HSMM muscle
9 chr3:100474400-100501200 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr3:100475000-100499000 Weak transcription Placenta Placenta
11 chr3:100475600-100520000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr3:100478800-100502000 Weak transcription Psoas Muscle Psoas
13 chr3:100488600-100504600 Weak transcription Adipose Nuclei Adipose
14 chr3:100489600-100500200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr3:100489800-100504800 Weak transcription Left Ventricle heart
16 chr3:100492400-100501000 Strong transcription Stomach Smooth Muscle stomach
17 chr3:100493000-100497200 Strong transcription Fetal Muscle Trunk muscle
18 chr3:100493000-100497200 Strong transcription Fetal Muscle Leg muscle
19 chr3:100493800-100497200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr3:100494000-100496800 Enhancers NHLF lung
21 chr3:100494000-100497200 Genic enhancers Osteobl bone
22 chr3:100494400-100496800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr3:100494400-100496800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr3:100494400-100496800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr3:100494400-100497200 Genic enhancers NHDF-Ad bronchial
26 chr3:100494600-100496800 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr3:100494600-100496800 Enhancers NH-A brain
28 chr3:100494800-100499200 Strong transcription Fetal Stomach stomach
29 chr3:100494800-100501600 Weak transcription HMEC breast
30 chr3:100494800-100523400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr3:100495000-100496800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr3:100495000-100497200 Strong transcription Muscle Satellite Cultured Cells --
33 chr3:100495000-100499200 Strong transcription HSMMtube muscle
34 chr3:100495000-100501000 Weak transcription Colon Smooth Muscle Colon
35 chr3:100495200-100497200 Strong transcription Fetal Lung lung
36 chr3:100495400-100496800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr3:100495400-100496800 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr3:100495400-100497200 Strong transcription Duodenum Smooth Muscle Duodenum
39 chr3:100495600-100496800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:100495600-100499000 Strong transcription Ovary ovary
41 chr3:100495800-100496800 Enhancers Placenta Amnion Placenta Amnion
42 chr3:100496200-100504200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr3:100496400-100497200 Strong transcription Fetal Intestine Large intestine
44 chr3:100496600-100496800 ZNF genes & repeats Aorta Aorta
45 chr3:100496600-100500000 Weak transcription NHEK skin
46 chr3:100496600-100500400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015