The 2.0 version of rSNPBase

Variant report

Variant rs56254963
Chromosome Location chr3:100508713-100508714
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100475600-100520000 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr3:100494800-100523400 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr3:100496800-100511200 Weak transcription Aorta Aorta
4 chr3:100501200-100516600 Weak transcription HSMM muscle
5 chr3:100502200-100518600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr3:100502400-100530400 Weak transcription Colon Smooth Muscle Colon
7 chr3:100502600-100516800 Weak transcription Rectal Smooth Muscle rectum
8 chr3:100505000-100510400 Weak transcription Psoas Muscle Psoas
9 chr3:100505000-100515400 Weak transcription Adipose Nuclei Adipose
10 chr3:100505000-100515400 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr3:100505000-100516600 Weak transcription Left Ventricle heart
12 chr3:100505200-100510800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr3:100505200-100512800 Weak transcription HSMMtube muscle
14 chr3:100505200-100515200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr3:100505200-100515200 Weak transcription Fetal Stomach stomach
16 chr3:100505200-100515400 Weak transcription Muscle Satellite Cultured Cells --
17 chr3:100505200-100515400 Weak transcription HUVEC blood vessel
18 chr3:100505200-100558200 Weak transcription Ovary ovary
19 chr3:100505200-100582800 Weak transcription Fetal Muscle Trunk muscle
20 chr3:100505600-100514400 Strong transcription Osteobl bone
21 chr3:100505800-100515400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr3:100505800-100515400 Weak transcription Fetal Lung lung
23 chr3:100506000-100548400 Weak transcription Stomach Smooth Muscle stomach
24 chr3:100507000-100509000 Strong transcription Fetal Muscle Leg muscle
25 chr3:100507000-100515400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr3:100508000-100509200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr3:100508000-100509200 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr3:100508200-100509200 Genic enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015