The 2.0 version of rSNPBase

Variant report

Variant rs72934691
Chromosome Location chr3:98550481-98550482
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:98503400-98576400 Weak transcription Gastric stomach
2 chr3:98525600-98552400 Weak transcription Right Ventricle heart
3 chr3:98528200-98575400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:98528600-98562000 Weak transcription Rectal Smooth Muscle rectum
5 chr3:98534000-98552400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr3:98534200-98552200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr3:98536000-98552600 Weak transcription Pancreas Pancrea
8 chr3:98536200-98594200 Weak transcription HepG2 liver
9 chr3:98537000-98567000 Weak transcription Stomach Smooth Muscle stomach
10 chr3:98537000-98592800 Weak transcription K562 blood
11 chr3:98537400-98551200 Weak transcription Fetal Heart heart
12 chr3:98538200-98569200 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr3:98538800-98552200 Weak transcription Left Ventricle heart
14 chr3:98541200-98552200 Weak transcription Fetal Muscle Trunk muscle
15 chr3:98541200-98567000 Weak transcription Liver Liver
16 chr3:98541400-98565000 Weak transcription HUVEC blood vessel
17 chr3:98542800-98551200 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr3:98543000-98552400 Weak transcription NHLF lung
19 chr3:98543400-98552400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr3:98543400-98552400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr3:98543400-98552400 Weak transcription Fetal Stomach stomach
22 chr3:98543600-98551200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr3:98543600-98552200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr3:98543800-98551000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr3:98545400-98552200 Weak transcription Ovary ovary
26 chr3:98545400-98552400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr3:98545400-98552400 Weak transcription NHDF-Ad bronchial
28 chr3:98545400-98561600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr3:98545600-98551200 Weak transcription HSMM muscle
30 chr3:98545600-98551600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr3:98545800-98551000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:98545800-98551200 Weak transcription Osteobl bone
33 chr3:98545800-98552200 Weak transcription HMEC breast
34 chr3:98546400-98550600 Weak transcription HSMMtube muscle
35 chr3:98546800-98551200 Weak transcription NHEK skin
36 chr3:98546800-98551400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:98546800-98552400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr3:98547000-98552200 Weak transcription Fetal Lung lung
39 chr3:98548800-98552000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:98548800-98566600 Weak transcription Adipose Nuclei Adipose
41 chr3:98550000-98552800 Strong transcription NH-A brain
42 chr3:98550000-98553200 Strong transcription Muscle Satellite Cultured Cells --
43 chr3:98550200-98551200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr3:98550200-98554200 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr3:98550200-98568600 Weak transcription Thymus Thymus
46 chr3:98550400-98550800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
47 chr3:98550400-98552200 Strong transcription A549 lung

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Last update: Aug 31, 2015