Variant report

Variant rs72947557
Chromosome Location chr3:52579713-52579714
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52571400-52594200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:52572200-52581000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr3:52572200-52584400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:52572400-52580600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr3:52572400-52581800 Weak transcription Placenta Amnion Placenta Amnion
6 chr3:52572400-52594200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr3:52572400-52633000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr3:52573200-52582000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr3:52573200-52583400 Weak transcription H9 Cell Line embryonic stem cell
10 chr3:52573200-52585000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr3:52573200-52586400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr3:52573200-52589600 Strong transcription iPS-20b Cell Line embryonic stem cell
13 chr3:52573200-52590400 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr3:52573400-52580600 Weak transcription Fetal Brain Male brain
15 chr3:52573400-52585200 Weak transcription Small Intestine intestine
16 chr3:52573400-52595000 Weak transcription Stomach Mucosa stomach
17 chr3:52573600-52580600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr3:52573600-52580600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr3:52573600-52581200 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr3:52573600-52581200 Weak transcription Esophagus oesophagus
21 chr3:52573600-52582000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr3:52573600-52582000 Weak transcription Ovary ovary
23 chr3:52573600-52583200 Weak transcription Colonic Mucosa Colon
24 chr3:52573600-52598400 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr3:52573800-52584600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr3:52574200-52581800 Weak transcription Pancreas Pancrea
27 chr3:52574200-52583200 Weak transcription Spleen Spleen
28 chr3:52574200-52588400 Strong transcription Liver Liver
29 chr3:52574400-52580600 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr3:52574400-52581200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr3:52574400-52623800 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr3:52574600-52594200 Weak transcription K562 blood
33 chr3:52574600-52598800 Strong transcription Primary T helper cells fromperipheralblood blood
34 chr3:52574800-52605000 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr3:52575200-52580400 Weak transcription Primary hematopoietic stem cells blood
36 chr3:52575200-52580600 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr3:52575400-52580600 Weak transcription Primary T cells from cord blood blood
38 chr3:52575600-52580600 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr3:52575600-52585200 Weak transcription Brain Angular Gyrus brain
40 chr3:52575800-52580400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr3:52575800-52580600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr3:52575800-52580600 Weak transcription Fetal Kidney kidney
43 chr3:52575800-52581200 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr3:52575800-52581200 Weak transcription HepG2 liver
45 chr3:52575800-52584400 Weak transcription Hela-S3 cervix
46 chr3:52576000-52580600 Weak transcription H1 Cell Line embryonic stem cell
47 chr3:52576000-52580600 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr3:52576000-52581000 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr3:52576000-52581200 Weak transcription Rectal Smooth Muscle rectum
50 chr3:52576000-52590400 Weak transcription iPS-15b Cell Line embryonic stem cell

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