The 2.0 version of rSNPBase

Variant report

Variant rs72949180
Chromosome Location chr4:144333168-144333169
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144312800-144336800 Weak transcription Fetal Muscle Trunk muscle
2 chr4:144318200-144337000 Weak transcription Fetal Intestine Large intestine
3 chr4:144318200-144362400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr4:144319200-144336600 Weak transcription Fetal Kidney kidney
5 chr4:144322200-144334000 Enhancers Fetal Heart heart
6 chr4:144323200-144335800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr4:144324800-144333200 Weak transcription Fetal Brain Female brain
8 chr4:144324800-144336800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr4:144326000-144336600 Weak transcription Placenta Placenta
10 chr4:144326200-144337200 Weak transcription Primary monocytes fromperipheralblood blood
11 chr4:144326600-144336600 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr4:144326800-144333400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr4:144327200-144337200 Weak transcription Fetal Intestine Small intestine
14 chr4:144327600-144337800 Weak transcription Colonic Mucosa Colon
15 chr4:144327800-144361200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr4:144327800-144388200 Weak transcription HepG2 liver
17 chr4:144328000-144333600 Enhancers Colon Smooth Muscle Colon
18 chr4:144328000-144336400 Weak transcription Duodenum Mucosa Duodenum
19 chr4:144328000-144338600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr4:144328000-144338800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr4:144328000-144346400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr4:144328000-144359200 Weak transcription Esophagus oesophagus
23 chr4:144328200-144333200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:144328600-144337000 Weak transcription Liver Liver
25 chr4:144328800-144340000 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr4:144329000-144336600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr4:144329000-144359400 Weak transcription K562 blood
28 chr4:144329200-144338200 Weak transcription Primary B cells from cord blood blood
29 chr4:144329400-144336200 Weak transcription Primary hematopoietic stem cells blood
30 chr4:144329400-144336400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr4:144329400-144337200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr4:144329400-144338600 Weak transcription Primary B cells from peripheral blood blood
33 chr4:144329800-144336400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr4:144329800-144336600 Weak transcription Fetal Lung lung
35 chr4:144329800-144352600 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr4:144330000-144334200 Enhancers Duodenum Smooth Muscle Duodenum
37 chr4:144330200-144334000 Enhancers Cortex derived primary cultured neurospheres brain
38 chr4:144331200-144333400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr4:144331400-144334000 Enhancers HUVEC blood vessel
40 chr4:144331600-144333400 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr4:144331600-144334000 Enhancers Fetal Adrenal Gland Adrenal Gland
42 chr4:144331600-144334800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr4:144331800-144333400 Enhancers Psoas Muscle Psoas
44 chr4:144331800-144333400 Enhancers Rectal Mucosa Donor 31 rectum
45 chr4:144332000-144333400 Enhancers Fetal Muscle Leg muscle
46 chr4:144332000-144334000 Enhancers Adipose Nuclei Adipose
47 chr4:144332000-144337600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr4:144332200-144333200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr4:144332200-144333400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr4:144332200-144333400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015