The 2.0 version of rSNPBase

Variant report

Variant rs28743166
Chromosome Location chr4:144327761-144327762
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144312600-144328600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr4:144312800-144331400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr4:144312800-144336800 Weak transcription Fetal Muscle Trunk muscle
4 chr4:144313800-144332000 Weak transcription Placenta Amnion Placenta Amnion
5 chr4:144318200-144337000 Weak transcription Fetal Intestine Large intestine
6 chr4:144318200-144362400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr4:144319200-144336600 Weak transcription Fetal Kidney kidney
8 chr4:144320600-144328600 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr4:144321800-144330200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr4:144322200-144334000 Enhancers Fetal Heart heart
11 chr4:144323200-144335800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr4:144323400-144328400 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr4:144323400-144330400 Enhancers HUVEC blood vessel
14 chr4:144323600-144328000 Enhancers Duodenum Smooth Muscle Duodenum
15 chr4:144323600-144328200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
16 chr4:144323600-144328200 Enhancers Ovary ovary
17 chr4:144323600-144328600 Enhancers Liver Liver
18 chr4:144324000-144332400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
19 chr4:144324600-144332800 Weak transcription HSMM muscle
20 chr4:144324800-144329000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr4:144324800-144330200 Enhancers Rectal Smooth Muscle rectum
22 chr4:144324800-144331800 Enhancers Brain Anterior Caudate brain
23 chr4:144324800-144332200 Enhancers Brain Hippocampus Middle brain
24 chr4:144324800-144332400 Enhancers Brain Angular Gyrus brain
25 chr4:144324800-144333200 Weak transcription Fetal Brain Female brain
26 chr4:144324800-144336800 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr4:144325000-144329000 Enhancers Brain Cingulate Gyrus brain
28 chr4:144325400-144328000 Enhancers Left Ventricle heart
29 chr4:144325400-144328000 Enhancers Psoas Muscle Psoas
30 chr4:144325400-144328000 Enhancers Right Ventricle heart
31 chr4:144325400-144328200 Enhancers Sigmoid Colon Sigmoid Colon
32 chr4:144325400-144328200 Enhancers NHLF lung
33 chr4:144325400-144329400 Enhancers Primary B cells from peripheral blood blood
34 chr4:144325600-144328000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr4:144325600-144328000 Enhancers Spleen Spleen
36 chr4:144325800-144328200 Enhancers Cortex derived primary cultured neurospheres brain
37 chr4:144325800-144331800 Weak transcription HSMMtube muscle
38 chr4:144326000-144332000 Weak transcription Aorta Aorta
39 chr4:144326000-144336600 Weak transcription Placenta Placenta
40 chr4:144326200-144337200 Weak transcription Primary monocytes fromperipheralblood blood
41 chr4:144326400-144328400 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr4:144326600-144328000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr4:144326600-144328000 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr4:144326600-144328000 Enhancers Stomach Mucosa stomach
45 chr4:144326600-144328600 Enhancers Rectal Mucosa Donor 31 rectum
46 chr4:144326600-144336600 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr4:144326800-144328000 Enhancers Gastric stomach
48 chr4:144326800-144328000 Enhancers Lung lung
49 chr4:144326800-144328000 Enhancers Right Atrium heart
50 chr4:144326800-144328400 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015