The 2.0 version of rSNPBase

Variant report

Variant rs10017771
Chromosome Location chr4:144318082-144318083
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144303400-144326600 Weak transcription Colonic Mucosa Colon
2 chr4:144304200-144320000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr4:144307400-144323600 Enhancers Brain Hippocampus Middle brain
4 chr4:144308800-144319400 Enhancers Brain Cingulate Gyrus brain
5 chr4:144309200-144327600 Weak transcription Esophagus oesophagus
6 chr4:144310200-144325600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr4:144311200-144320400 Weak transcription Stomach Mucosa stomach
8 chr4:144311400-144320000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr4:144311600-144321600 Enhancers Brain Angular Gyrus brain
10 chr4:144312200-144321000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr4:144312400-144319000 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr4:144312400-144323600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr4:144312600-144323800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr4:144312600-144326400 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr4:144312600-144328600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr4:144312800-144324000 Weak transcription Fetal Intestine Small intestine
17 chr4:144312800-144331400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr4:144312800-144336800 Weak transcription Fetal Muscle Trunk muscle
19 chr4:144313000-144319200 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr4:144313000-144320200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr4:144313000-144323800 Weak transcription Fetal Muscle Leg muscle
22 chr4:144313200-144319000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr4:144313200-144319200 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr4:144313200-144320400 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr4:144313400-144320400 Weak transcription Duodenum Mucosa Duodenum
26 chr4:144313400-144323000 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr4:144313400-144323400 Weak transcription Fetal Brain Female brain
28 chr4:144313400-144323600 Weak transcription Primary hematopoietic stem cells blood
29 chr4:144313400-144324000 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr4:144313600-144319600 Enhancers Skeletal Muscle Male skeletal muscle
31 chr4:144313800-144318400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr4:144313800-144320400 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr4:144313800-144323400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr4:144313800-144323600 Weak transcription Liver Liver
35 chr4:144313800-144332000 Weak transcription Placenta Amnion Placenta Amnion
36 chr4:144314400-144318800 Weak transcription Stomach Smooth Muscle stomach
37 chr4:144314400-144321400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr4:144314600-144321800 Enhancers Fetal Heart heart
39 chr4:144314600-144323400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr4:144314800-144318200 Weak transcription HSMMtube muscle
41 chr4:144315600-144323600 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr4:144316200-144318200 Weak transcription Brain Anterior Caudate brain
43 chr4:144316200-144318400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr4:144316200-144323400 Weak transcription Adipose Nuclei Adipose
45 chr4:144316200-144323600 Weak transcription Small Intestine intestine
46 chr4:144316600-144319600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr4:144316800-144318600 Enhancers Skeletal Muscle Female skeletal muscle
48 chr4:144316800-144324400 Enhancers Brain Substantia Nigra brain
49 chr4:144317000-144318200 Strong transcription Fetal Intestine Large intestine
50 chr4:144317000-144318200 Genic enhancers Psoas Muscle Psoas

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Last update: Aug 31, 2015