The 2.0 version of rSNPBase

Variant report

Variant rs17739332
Chromosome Location chr4:144323529-144323530
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144303400-144326600 Weak transcription Colonic Mucosa Colon
2 chr4:144307400-144323600 Enhancers Brain Hippocampus Middle brain
3 chr4:144309200-144327600 Weak transcription Esophagus oesophagus
4 chr4:144310200-144325600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr4:144312400-144323600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr4:144312600-144323800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr4:144312600-144326400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr4:144312600-144328600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr4:144312800-144324000 Weak transcription Fetal Intestine Small intestine
10 chr4:144312800-144331400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr4:144312800-144336800 Weak transcription Fetal Muscle Trunk muscle
12 chr4:144313000-144323800 Weak transcription Fetal Muscle Leg muscle
13 chr4:144313400-144323600 Weak transcription Primary hematopoietic stem cells blood
14 chr4:144313400-144324000 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr4:144313800-144323600 Weak transcription Liver Liver
16 chr4:144313800-144332000 Weak transcription Placenta Amnion Placenta Amnion
17 chr4:144315600-144323600 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr4:144316200-144323600 Weak transcription Small Intestine intestine
19 chr4:144316800-144324400 Enhancers Brain Substantia Nigra brain
20 chr4:144317400-144323600 Weak transcription Primary B cells from cord blood blood
21 chr4:144317400-144323800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr4:144317400-144327600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr4:144317800-144325800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:144318200-144325600 Weak transcription Lung lung
25 chr4:144318200-144327600 Weak transcription K562 blood
26 chr4:144318200-144337000 Weak transcription Fetal Intestine Large intestine
27 chr4:144318200-144362400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr4:144319200-144323800 Weak transcription Rectal Smooth Muscle rectum
29 chr4:144319200-144324800 Weak transcription Stomach Smooth Muscle stomach
30 chr4:144319200-144336600 Weak transcription Fetal Kidney kidney
31 chr4:144319400-144323600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr4:144319400-144323600 Weak transcription NHDF-Ad bronchial
33 chr4:144319400-144324000 Weak transcription HSMM muscle
34 chr4:144319800-144323600 Weak transcription Fetal Lung lung
35 chr4:144319800-144323800 Weak transcription Fetal Stomach stomach
36 chr4:144320000-144325600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr4:144320200-144323600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr4:144320200-144324400 Enhancers Brain Cingulate Gyrus brain
39 chr4:144320200-144325600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr4:144320400-144324400 Enhancers Brain Inferior Temporal Lobe brain
41 chr4:144320600-144323600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr4:144320600-144323800 Weak transcription GM12878-XiMat blood
43 chr4:144320600-144328600 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr4:144320800-144323600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr4:144320800-144323600 Weak transcription NHLF lung
46 chr4:144320800-144324400 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr4:144320800-144326600 Weak transcription Stomach Mucosa stomach
48 chr4:144321000-144327600 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr4:144321200-144324400 Weak transcription Duodenum Mucosa Duodenum
50 chr4:144321400-144324200 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015